Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03570 ATGTTCCTTCATCAAACCACCATGAAATTGAGTTGCAATGGTTGTCGTGTTCTTCGTAAAGGTTGCACTGAAGATTGCATCATCAAGCCTTGTCTTGAGTGGATTAGTTCTCCTGAATCTCAAGGAAACGCCACCCTCTTCCTTGCCAAATTCTTTGGCCGAACTGGCTTGCTCAACCTTCTTGCCAATGCTTCCAATCAAAATGCCTCAGCTGTTTTTAGATCACTGTTGTACGAGGCTTCAGGTAGATTGATAAATCCAACTTATGGAGCACTAGGTTTATTTTGGACAGGAGAATGGAGCCGATGTGAAGCTGCTGTTGAAGCTGTGCTGAGTGGATCAGACATTAACAAAGTCATAGTTGTTGATGAAAATATATCATCAACTACACCCATGACTGAAAATCATGTCCTTCCAGTTCCAACAACCTATGATATACGCCACGTGGCAAAAGGCTCCAATGTGGACATCAAAGAAAAAACACAATTCAAGAAAATTGGACAAGTTTTCAAAACAAAGCCACGAGTTGATTCTGTCAATTCAGAAACACTTTTGAAATCCTTTTTAGAAAATACCAATGCTAAAACTATAGAGGCTTCCTCGATGAATCATATTGAGCTGAATGAAACCGTTGAGACTCACGTGAACTTAGAGCTCAGTCTCGGCTTCAATGGCAAACCAAATCAATCAAAAGAAAAAAATTGA 705 0.4 MFLHQTTMKLSCNGCRVLRKGCTEDCIIKPCLEWISSPESQGNATLFLAKFFGRTGLLNLLANASNQNASAVFRSLLYEASGRLINPTYGALGLFWTGEWSRCEAAVEAVLSGSDINKVIVVDENISSTTPMTENHVLPVPTTYDIRHVAKGSNVDIKEKTQFKKIGQVFKTKPRVDSVNSETLLKSFLENTNAKTIEASSMNHIELNETVETHVNLELSLGFNGKPNQSKEKN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03570 234 ProSiteProfiles LOB domain profile. 10 116 IPR004883 -
Vivi1g03570 234 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 10 209 - -
Vivi1g03570 234 Pfam Lateral organ boundaries (LOB) domain 11 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03570 Vivi-Chr1 76581250 76582520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03570 8 151 AS2 family AT1G68510 54.861 2.36e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi1g03570 LOB 5.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03570 - - mtr:25485496 293.893