Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03569 ATGAAATTGAGTTGCAATGGTTGTCGTGTTCTTCGCAAAGGTTGTAGTGAAGACTGCATCATCAAGCCTTGCCTTGAGTGGATTAGTTCCCCAGAATCTCAAGGCAATGCCACCCTCTTCCTTGCCAAATTTTTTGGTCGAACCGGCTTCCTCAACCTTCTCGCCAATGGTTCTATTCAAAATGCCCCAGCTGTTTTTAGATCACTGTTGTACGAGGCTTCGGGTAGATTGGTGAATCCAACACATGGAGCACTTGGTTTATTTTGGACAGGAGAGTGGAGCCGATGTGAAGCTGCAGTTGAAGCTGTGCTAACTGGATCTGACATTAACAAAGCTATAGGTGATGATGAAAAGACATCATTGACTACTCTCATGGAAGAAAATCATGCTCTTCCTGTTCCAACAACCTATGACATACGACATGTGGCAAAAGGCACCAATGTGGACATCAAAGAGAAAACTCAATTCAAGAGAGTTGGACAAATTTTCAAAATCAAGCCACGAGGTGGTTTTGTCAACTCGGGAACACTTTTGAAATCGTTTTTAGAAAATACCAATGTAGAAACTATGGAGGCTTCGTCGGCAAATCAACTTGAGCCAAACGAAGCAGTTGAGACTCAAGTGAACTTAGAGCTCAGTCTCGGTTTCAATAGCAAATCAACTCAAGCAAAAGGAAAAAAATAG 684 0.424 MKLSCNGCRVLRKGCSEDCIIKPCLEWISSPESQGNATLFLAKFFGRTGFLNLLANGSIQNAPAVFRSLLYEASGRLVNPTHGALGLFWTGEWSRCEAAVEAVLTGSDINKAIGDDEKTSLTTLMEENHALPVPTTYDIRHVAKGTNVDIKEKTQFKRVGQIFKIKPRGGFVNSGTLLKSFLENTNVETMEASSANQLEPNEAVETQVNLELSLGFNSKSTQAKGKK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03569 227 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Vivi1g03569 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 201 - -
Vivi1g03569 227 Pfam Lateral organ boundaries (LOB) domain 4 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03569 Vivi-Chr1 76532739 76533883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03569 1 215 AS2 family AT1G68510 45.417 1.88e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi1g03569 LOB 1.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03569 - - mtr:25485496 313.153