Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03523 ATGGCGATTAAAATCAACTCCATTGGTGTTCAGGGTTGGGGCGACATGAGGAGTCTCACCGTCCAGTTCATAACTGGACGATGGTTCGTCGTGTTCGCCTCCTTTTTAATCATGGCTGCCGCCGGAGCCACGTACATGTTCGCCTTATACTCCGGCGACATAAAAGATGCACTTGGCTATGACCAAAGCACACTAAATCTTCTATCTTTCTTCAAAGATTTTGGTGCTAATGTTGGTATCCTTGCAGGACTAGTCAACGAAATATATCCACCTTGGGTAGTTCTAACCATTGGTGCTGTTCTCAATTTCTTTGGCTACTTCATGATTTGGTTATCCGTGACCAAAAAAATAGCAACACCAAAAGTTTGGCAAATGTGTCTTTACATTTGCATTGGTGCAAACTCTCAGTCTTTTGCAAACACCGGTTCACTTGTTACTTGTGTGAAGAATTTCCCCGAATCTCGCGGCGCGGTTTTGGGAATTCTTAAAGGCTATGTTGGTCTCAGTGGCGCTATCATAACTCAGCTTTACTTTGCTTTTTATTTTAATGACTCCAAATCTTTGATTTTGTTAATAGGCTGGCTTCCGGCCGCTGTTTCCTTCGCGTTTCTTCGAACCATTCGATACATGAAACCTGTTCGACAAGTTAACGAGATTAAGGTTTTTTATAATTTCTTGTATATTTCTCTTGGTCTTGCTGGTTTTTTGTTGGCCATGATTGTCATAGAGAAGGAGACTACTTTCTCACAGGGTGAGTATGGTTTTAGCGCTGCAGTGGTTATTTTCTTGCTTCTTCTTCCTCTTGTTGTTGTTTTCATTGAAGAGAACAAGATTTGGCTGAGTAAGAAACTTGCTTTGGTTGATTCTTCGCCGGTGAAAATAGTGACAGAAGGTGAAATTGCGGAAACTGAAAAAGTCAACGCTGTTCATCCAGTTTCAACTTCACCTCCAAAGAAAGATCCAAGATGGTTTGAAGATGTGTTTAATCCACCAGCAAGAGGTGAGGATTATACAATTCTTCAAGCACTTTTCAGCATAGACATGTTGATACTATTTATCGCGTGTATCTCGGGTGTTGGTGGAGCGTTGACAGCGATAGATAATCTTAGTCAGATAGGAACATCGCTTCGATATCCGAAGAAAAGCATAAGTACTTTCGTGTCATTAGTAAGTATATGGAATTATCTAGGACGAGTTTTCTCAGGATTTGTTTCGGAATATGTTCTAGTTAAGTACAAATTTCCTCGTCCTCTAATGCTTACTTTGATTCTCTTCATCTCTTGTATTGGCCATCTTCTGATAGCGTTTGATGTTCCGAATGGTCTCTACGCAGCATCTGTGATTATTGGATTTTGTTTTGGCGCGCAATGGCCATTACTTTTCGCGATAATTTCAGAACTTTTTGGACTTAAATATTACGCAACTTTGTATAATTTCGGAAGTGTAGCGAGTCCTCTTGGGTTATATGTTCTTAATGTGATGATCACGGGTCATTTGTATGACAAAGAAGGTAAAAAACAATTGGTCGCGCGCGGAGAAACAAGACGAGAAGGACAACAATTGAATTGTGTTGGTGTTGAATGTTTCAAAATGTCTTTCATTATTATTACAGCTGCAACTTTTATAGGTGCTGTGGTTTCACTTATTTTAGTGGCTAGAACAAGAAAGTTTTACAAAGGGGACATATACAAGAAGTTTAGAGATGAAGCTGAAATGGTGGAGGTAAAGAACAAGGAAGGTGCCAAAGTTGATCAACCACATGTGGTAACAACTTAG 1776 0.3998 MAIKINSIGVQGWGDMRSLTVQFITGRWFVVFASFLIMAAAGATYMFALYSGDIKDALGYDQSTLNLLSFFKDFGANVGILAGLVNEIYPPWVVLTIGAVLNFFGYFMIWLSVTKKIATPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYFAFYFNDSKSLILLIGWLPAAVSFAFLRTIRYMKPVRQVNEIKVFYNFLYISLGLAGFLLAMIVIEKETTFSQGEYGFSAAVVIFLLLLPLVVVFIEENKIWLSKKLALVDSSPVKIVTEGEIAETEKVNAVHPVSTSPPKKDPRWFEDVFNPPARGEDYTILQALFSIDMLILFIACISGVGGALTAIDNLSQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEYVLVKYKFPRPLMLTLILFISCIGHLLIAFDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVMITGHLYDKEGKKQLVARGETRREGQQLNCVGVECFKMSFIIITAATFIGAVVSLILVARTRKFYKGDIYKKFRDEAEMVEVKNKEGAKVDQPHVVTT 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03523 591 FunFam Nodulin family protein 339 560 - -
Vivi1g03523 591 Pfam Nodulin-like 27 272 IPR010658 -
Vivi1g03523 591 SUPERFAMILY MFS general substrate transporter 27 561 IPR036259 -
Vivi1g03523 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 561 - -
Vivi1g03523 591 Gene3D MFS general substrate transporter like domains 342 559 IPR036259 -
Vivi1g03523 591 CDD MFS_Mch1p_like 26 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03523 Vivi-Chr1 75236867 75238926 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03523 14 569 Nodulin-like Gene Family AT2G39210 70.304 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03523 - - pvu:PHAVU_007G024800g 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03523 1 75236867 75238926 Vivi1g03523 1 75236867 75238926 ECH