Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03511 ATGGGAAAGAAAATTTTGAAACTATCTTCACTTTTCAAAACCAAACAACATCCATGGCAATTCTTACCTTCCTGTAACCACCATCCAAAGACTCTCTCCTTTCGAACTGGTGCTGCTGTTGTTGATGATGACATGTTCAAGACAGTTAACTCAGTGTTCTTCGACCAAACAGACAATCAAAGCAATATCGAAACACCGAAGTCATGTTTCACAACAACCTCGTCTGATTCTGTCGCGAGTTTCTCGACAGAATCAGACGAGTATTACTGCTACAACGACGGAGAGCTCTTGGAGACATTGGTACGAGGAGTTAAATCCGAGAGGTCTTCAGAGAGGCTGTTTTTTGAAGCCGAGGACACGAGTTCGATCTTGGAAAAGGCGAAGGCCAACGATTTTCCGTTTAAGGAAAGTGTTGTGTTGGCTTTGGAGTCAGATGATCCTTATGAGGATTTCAAGAGATCAATGGAGGAGATGGTCGAGTCACATGGTGTGAAGGATTGGGAAGGTTTGGAGGAACTTTTGAGTTGGTATTTGAGAGTTAATGGGAAGAATAATCATGGGTTTATTGTTGGTGCTTTTGTTGATTTGTTGATTAGTTTGACAGGCTCTAAGGATTCTAGTAAGTCTTGTTCTGATTTCACTTTGTATTCTTCTGCTGTTTCTTCTTTTGCTTCTTCACCAAATTTGTATTTATCTGAGGGGCAGAATGAGATTACTGAGATTGAAGATAATGATAATGTAACAGATTCTTAG 753 0.4037 MGKKILKLSSLFKTKQHPWQFLPSCNHHPKTLSFRTGAAVVDDDMFKTVNSVFFDQTDNQSNIETPKSCFTTTSSDSVASFSTESDEYYCYNDGELLETLVRGVKSERSSERLFFEAEDTSSILEKAKANDFPFKESVVLALESDDPYEDFKRSMEEMVESHGVKDWEGLEELLSWYLRVNGKNNHGFIVGAFVDLLISLTGSKDSSKSCSDFTLYSSAVSSFASSPNLYLSEGQNEITEIEDNDNVTDS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03511 250 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 44 200 IPR038933 GO:0045892
Vivi1g03511 250 Pfam Transcriptional repressor, ovate 144 200 IPR006458 -
Vivi1g03511 250 ProSiteProfiles OVATE domain profile. 140 199 IPR006458 -
Vivi1g03511 250 NCBIfam uncharacterized plant-specific domain TIGR01568 139 201 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03511 Vivi-Chr1 74983622 74984612 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi1g03511 Ovate 5.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03511 - - mtr:25485550 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05667 6 162954226 162955826 Vivi1g03511 1 74983622 74984612 ECH
Vivi1g03511 1 74983622 74984612 Vivi1g03511 1 74983622 74984612 ECH