Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03474 ATGAAGTCATGCTCAAAGACCATTGTCCTTGTGGCTAGTGCAGGATATGGATCCGACCACACCGTCGCTGTTGATATTTTTGAAACTGTAAGGTCCACAAATGGACTCACAGTTGCTGTAGTTTTGAAGCCATTTAGCTTTGAAGGGTTGAGACGAAAAGATGAGGTAAACGCTTTGATGGGGAAACTTAAGAAGAATACTAATTTACTTATCGAAATTGACATTGATGCACTTCTCAAAAAAGACTTGTTGACTCTAGACGAGGCTATGAAAACTGCAAATGATGCTGTTTTGCTAGCTATTAAGGCCATATCAGTTCTAAAATCAGAAATACACAGAAAGTTTATAGATAGATTGCACAATAGCATGAAAGAAGCCAGCAATTCTGAAATTATTAAAATATTGGAATGCTATAAAGAAGCCAGAATTGGATTTGGGGCTGCTTATAATATCAAAACTTCAATTTTGCAGTCTATATTTGATAGTCCTTTCCTGGGCGCTTCTTTGAAGGATCCAAATAGTGCAGTTATATGCATTATTGCGTGTTCTGAACCCATCAATGATAGTGATAAAGCAGTCTTTCTGCGTACTTTTCGTCAAACAACAGAATACACGAGGGATATTATAATATCAACAGTACTTGAGCCTGATGTCGAGCCCAACCTATTAATAACAACTGTCCTTACACTTGGCAGCTTAACCGTGCAACAACCTTCCCCCAATGGTGGTATACTATCCAAACTTGCCCTGCATTTTCCTCTTGTTTTTAGCTTTTGGGGAAGACATAGTGTGCAACAAAATGTCTCTGGGAAAGAGGATGCGGTATCTTCTCATGAAATGATGAGATCTTATAGCATTGATGAGAGGGAAAATATAGTTATTCCCAGTACTGTTAATGACAGATTTGACAAGCAGTATCCAGAGTTGGAGCCAGACGCGAGCAACAACAGTTCAAAGTTGTCTGTTTCAAGGGATTCTGAAAAAAATGAAGATTCATTTGACAATATAGCCAATTCTCCTATCCCTTATGATTCCATTAACGAAGAAGGCGAATGTGCTTTTCAGAGGGAACAACTTGGAAACTGGAATCTGGGCCCTGGATTTGAAGTGGCAAAAGAATGGGCCCAAGAAAGGGAAGCTGATGTTACACCAGTGGTTGATAGCCTAAGCATATTCCACCTTCCTGTTGGTGTTAGGCCTTCAGAAGAGTTGAAAGACAGTTTAGAAATCTCATTTATGTCAAAAAAGCATGAGCCAGATTCAGGTGTGGAAGCAGTGAAGGAATTTACATCTTCACTTCTGAAGCCAAAACATGCTAATAGCAATAAGCCAAAGAAGCATGGTGTTTTGTCTGTTCGTGCTGCATCTATGCTGGAGGCAGAACGTGATTTGTCAATGAAGTGGAGTCCTGTTGTGGAAATACAATATAGGGGAGGAAGATACAAGGGGCGATGCCAAGGTGGTCTGCCTGAAGGGAAGGGGCGTCTTGTTCTTCGAGATGGAAATATCTATGATGGTTCATGGCACAGTGGCAAGAGATCAGGTGCAGGAACATTCTATTTCAAGAACGGAGATATGTTTCAAGGATCATGGAGGGATGATGCCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTCTGGAAGGGAAAGGCAAATGGAGAGGGGCGGTTTTACACAAAGTCTGGTGATGCCTTCTTCGGCAATTTCAAAGACGGATGGCGGCATGGCCAATTTCTTTGTGTGAATGCAAATGGAACGAGAGGGAGTATATTTCTTCGCCAAACTTATATTTACCGCCCTTTAAGTCTTCATTCTGCTATAGATATGACATTGACATTGAGAGGTAAAATAAGTTTTGTTGAAGGACCTTAA 1896 0.4082 MKSCSKTIVLVASAGYGSDHTVAVDIFETVRSTNGLTVAVVLKPFSFEGLRRKDEVNALMGKLKKNTNLLIEIDIDALLKKDLLTLDEAMKTANDAVLLAIKAISVLKSEIHRKFIDRLHNSMKEASNSEIIKILECYKEARIGFGAAYNIKTSILQSIFDSPFLGASLKDPNSAVICIIACSEPINDSDKAVFLRTFRQTTEYTRDIIISTVLEPDVEPNLLITTVLTLGSLTVQQPSPNGGILSKLALHFPLVFSFWGRHSVQQNVSGKEDAVSSHEMMRSYSIDERENIVIPSTVNDRFDKQYPELEPDASNNSSKLSVSRDSEKNEDSFDNIANSPIPYDSINEEGECAFQREQLGNWNLGPGFEVAKEWAQEREADVTPVVDSLSIFHLPVGVRPSEELKDSLEISFMSKKHEPDSGVEAVKEFTSSLLKPKHANSNKPKKHGVLSVRAASMLEAERDLSMKWSPVVEIQYRGGRYKGRCQGGLPEGKGRLVLRDGNIYDGSWHSGKRSGAGTFYFKNGDMFQGSWRDDAMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCVNANGTRGSIFLRQTYIYRPLSLHSAIDMTLTLRGKISFVEGP 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03474 631 Gene3D - 483 532 - -
Vivi1g03474 631 Gene3D - 533 595 - -
Vivi1g03474 631 PRINTS Cell division protein FtsZ signature 35 56 IPR003008 GO:0005525
Vivi1g03474 631 PRINTS Cell division protein FtsZ signature 129 150 IPR003008 GO:0005525
Vivi1g03474 631 MobiDBLite consensus disorder prediction 306 344 - -
Vivi1g03474 631 Pfam MORN repeat 486 502 IPR003409 -
Vivi1g03474 631 Pfam MORN repeat 504 526 IPR003409 -
Vivi1g03474 631 Pfam MORN repeat 527 549 IPR003409 -
Vivi1g03474 631 Pfam MORN repeat 554 571 IPR003409 -
Vivi1g03474 631 Pfam MORN repeat 574 585 IPR003409 -
Vivi1g03474 631 SUPERFAMILY Tubulin nucleotide-binding domain-like 6 106 IPR036525 -
Vivi1g03474 631 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 478 595 - -
Vivi1g03474 631 SMART morn 479 500 IPR003409 -
Vivi1g03474 631 SMART morn 502 523 IPR003409 -
Vivi1g03474 631 SMART morn 525 546 IPR003409 -
Vivi1g03474 631 SMART morn 571 592 IPR003409 -
Vivi1g03474 631 Gene3D Tubulin/FtsZ, GTPase domain 2 230 IPR036525 -
Vivi1g03474 631 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 6 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03474 Vivi-Chr1 74311493 74321064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03474 1 597 PP2C-type Phosphatase Gene Family AT1G75010 49.357 0.0 568