Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03473 ATGGAACTTTCTGCATTCCCCAACTTCAAACTTGTTTCTAATTCTTCCATATTCCATTCCACCTCGAATCAATTTCACTCTCGCTACTCTCTTTCTCTTCGTCACTACCATTATGGCTTTCGGTGTCGCAATTCAAAACAGGTACCGCAGATCAGGATGTGCTCGGAGAAGCTTCCGCTGTCGAACGGTTACGGTGGAGTCGAAATCCGTGAAACCAATTCCGATTTCGTCGAAGTGATTGCCATTGGCGGTAGGAAGGACGCGGTTCTTGATTTCTGCTTCAACTCGCAGTTTCAGTTGTCTTCTCTGCGCTTTTGGAATGTCATTGTAAAAGATTCACAAGAGGCGCAATTACAACAAAGGCCAACTAAAGAAGAACCTTGCTCAGGAATTGTCAAAGCTCCAGTATTTATGAAGTCATGCTCAAAGACCATTGTCCTTGTGGCTAGTGCAGGATATGGATCCGACCACACCGTCGCTGTTGATATTTTTGAAACTGTAAGGTCCACAAATGGACTCACAGTTGCTGTAGTTTTGAAGCCATTTAGCTTTGAAGGGTTGAGACGAAAAGATGAGGTAAACGCTTTGATGGGGAAACTTAAGAAGAATACTAATTTACTTATCGAAATTGACATTGATGCACTTCTCAAAAAAGACTTGTTGACTCTAGACGAGGCTATGAAAACTGCAAATGATGCTGTTTTGCTAGCTATTAAGGCCATATCAGTTCTAAAATCAGAAATACACAGAAAGTTTATAGATAGATTGCACAATAGCATGAAAGAAGCCAGCAATTCTGAAATTATTAAAATATTGGAATGCTATAAAGAAGCCAGAATTGGATTTGGGGCTGCTTATAATATCAAAACTTCAATTTTGCAGTCTATATTTGATAGTCCTTTCCTGGGCGCTTCTTTGAAGGATCCAAATAGTGCAGTTATATGCATTATTGCGTGTTCTGAACCCATCAATGATAGTGATAAAGCAGTCTTTCTGCGTACTTTTCGTCAAACAACAGAATACACGAGGGATATTATAATATCAACAGTACTTGAGCCTGATGTCGAGCCCAACCTATTAATAACAACTGTCCTTACACTTGGCAGCTTAACCGTGCAACAACCTTCCCCCAATGGTGGTATACTATCCAAACTTGCCCTGCATTTTCCTCTTGTTTTTAGCTTTTGGGGAAGACATAGTGTGCAACAAAATGTCTCTGGGAAAGAGGATGCGGTATCTTCTCATGAAATGATGAGATCTTATAGCATTGATGAGAGGGAAAATATAGTTATTCCCAGTACTGTTAATGACAGATTTGACAAGCAGTATCCAGAGTTGGAGCCAGACGCGAGCAACAACAGTTCAAAGTTGTCTGTTTCAAGGGATTCTGAAAAAAATGAAGATTCATTTGACAATATAGCCAATTCTCCTATCCCTTATGATTCCATTAACGAAGAAGGCGAATGTGCTTTTCAGAGGGAACAACTTGGAAACTGGAATCTGGGCCCTGGATTTGAAGTGGCAAAAGAATGGGCCCAAGAAAGGGAAGCTGATGTTACACCAGTGGTTGATAGCCTAAGCATATTCCACCTTCCTGTTGGTGTTAGGCCTTCAGAAGAGTTGAAAGACAGTTTAGAAATCTCATTTATGTCAAAAAAGCATGAGCCAGATTCAGGTGTGGAAGCAGTGAAGGAATTTACATCTTCACTTCTGAAGCCAAAACATGCTAATAGCAATAAGCCAAAGAAGCATGGTGTTTTGTCTGTTCGTGCTGCATCTATGCTGGAGGCAGAACGTGATTTGTCAATGAAGTGGAGTCCTGTTGTGGAAATACAATATAGGGGAGGAAGATACAAGGGGCGATGCCAAGGTGGTCTGCCTGAAGGGAAGGGGCGTCTTGTTCTTCGAGATGGAAATATCTATGATGGTTCATGGCACAGTGGCAAGAGATCAGGTGCAGGAACATTCTATTTCAAGAACGGAGATATGTTTCAAGGATCATGGAGGGATGATGCCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTCTGGAAGGGAAAGGCAAATGGAGAGGGGCGGTTTTACACAAAGTCTGGTGATGCCTTCTTCGGCAATTTCAAAGACGGATGGCGGCATGGCCAATTTCTTTGTGTGAATGCAAATGGAACGAGAGGGAGTATATTTCTTCGCCAAACTTATATTTACCGCCCTTTAAGTCTTCATTCTGCTATAGATATGACATTGACATTGAGAGGTAAAATAAGTTTTGTTGAAGGACCTTAA 2307 0.4148 MELSAFPNFKLVSNSSIFHSTSNQFHSRYSLSLRHYHYGFRCRNSKQVPQIRMCSEKLPLSNGYGGVEIRETNSDFVEVIAIGGRKDAVLDFCFNSQFQLSSLRFWNVIVKDSQEAQLQQRPTKEEPCSGIVKAPVFMKSCSKTIVLVASAGYGSDHTVAVDIFETVRSTNGLTVAVVLKPFSFEGLRRKDEVNALMGKLKKNTNLLIEIDIDALLKKDLLTLDEAMKTANDAVLLAIKAISVLKSEIHRKFIDRLHNSMKEASNSEIIKILECYKEARIGFGAAYNIKTSILQSIFDSPFLGASLKDPNSAVICIIACSEPINDSDKAVFLRTFRQTTEYTRDIIISTVLEPDVEPNLLITTVLTLGSLTVQQPSPNGGILSKLALHFPLVFSFWGRHSVQQNVSGKEDAVSSHEMMRSYSIDERENIVIPSTVNDRFDKQYPELEPDASNNSSKLSVSRDSEKNEDSFDNIANSPIPYDSINEEGECAFQREQLGNWNLGPGFEVAKEWAQEREADVTPVVDSLSIFHLPVGVRPSEELKDSLEISFMSKKHEPDSGVEAVKEFTSSLLKPKHANSNKPKKHGVLSVRAASMLEAERDLSMKWSPVVEIQYRGGRYKGRCQGGLPEGKGRLVLRDGNIYDGSWHSGKRSGAGTFYFKNGDMFQGSWRDDAMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCVNANGTRGSIFLRQTYIYRPLSLHSAIDMTLTLRGKISFVEGP 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03473 768 SMART morn 639 660 IPR003409 -
Vivi1g03473 768 SMART morn 616 637 IPR003409 -
Vivi1g03473 768 SMART morn 708 729 IPR003409 -
Vivi1g03473 768 SMART morn 662 683 IPR003409 -
Vivi1g03473 768 PRINTS Cell division protein FtsZ signature 172 193 IPR003008 GO:0005525
Vivi1g03473 768 PRINTS Cell division protein FtsZ signature 266 287 IPR003008 GO:0005525
Vivi1g03473 768 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 101 731 - -
Vivi1g03473 768 Gene3D - 620 669 - -
Vivi1g03473 768 Gene3D - 670 734 - -
Vivi1g03473 768 Pfam MORN repeat 623 639 IPR003409 -
Vivi1g03473 768 Pfam MORN repeat 664 686 IPR003409 -
Vivi1g03473 768 Pfam MORN repeat 641 663 IPR003409 -
Vivi1g03473 768 Pfam MORN repeat 711 722 IPR003409 -
Vivi1g03473 768 Gene3D Tubulin/FtsZ, GTPase domain 115 367 IPR036525 -
Vivi1g03473 768 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 615 732 - -
Vivi1g03473 768 SUPERFAMILY Tubulin nucleotide-binding domain-like 79 243 IPR036525 -
Vivi1g03473 768 MobiDBLite consensus disorder prediction 443 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03473 Vivi-Chr1 74311493 74321376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03473 75 734 PP2C-type Phosphatase Gene Family AT1G75010 47.737 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03473 - - gsj:114371951 1030.01