Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03472 ATGGAACTTTCTGCATTCCCCAACTTCAAACTTGTTTCTAATTCTTCCATATTCCATTCCACCTCGAATCAATTTCACTCTCGCTACTCTCTTTCTCTTCGTCACTACCATTATGGCTTTCGGTGTCGCAATTCAAAACAGGTACCGCAGATCAGGATGTGCTCGGAGAAGCTTCCGCTGTCGAACGGTTACGGTGGAGTCGAAATCCGTGAAACCAATTCCGATTTCGTCGAAGTGATTGCCATTGGCGGTAGGAAGGACGCGGTTCTTGATTTCTGCTTCAACTCGCAGTTTCAGTTGTCTTCTCTGCGCTTTTGGAATGTCATTGTAAAAGATTCACAAGAGGCGCAATTACAACAAAGGCCAACTAAAGAAGAACCTTGCTCAGGAATTGTCAAAGCTCCAGTATTTATGAAGTCATGCTCAAAGACCATTGTCCTTGTGGCTAGTGCAGGATATGGATCCGACCACACCGTCGCTGTTGATATTTTTGAAACTGTAAGGTCCACAAATGGACTCACAGTTGCTGTAGTTTTGAAGCCATTTAGCTTTGAAGGGTTGAGACGAAAAGATGAGGTAAACGCTTTGATGGGGAAACTTAAGAAGAATACTAATTTACTTATCGAAATTGACATTGATGCACTTCTCAAAAAAGACTTGTTGACTCTAGACGAGGCTATGAAAACTGCAAATGATGCTGTTTTGCTAGCTATTAAGGCCATATCAGTTCTAAAATCAGAAATACACAGAAAGTTTATAGATAGATTGCACAATAGCATGAAAGAAGCCAGCAATTCTGAAATTATTAAAATATTGGAATGCTATAAAGAAGCCAGAATTGGATTTGGGGCTGCTTATAATATCAAAACTTCAATTTTGCAGTCTATATTTGATAGTCCTTTCCTGGGCGCTTCTTTGAAGGATCCAAATAGTGCAGTTATATGCATTATTGCGTGTTCTGAACCCATCAATGATAGTGATAAAGCAGTCTTTCTGCGTACTTTTCGTCAAACAACAGAATACACGAGGGATATTATAATATCAACAGTACTTGAGCCTGATGTCGAGCCCAACCTATTAATAACAACTGTCCTTACACTTGGCTTAACCGTGCAACAACCTTCCCCCAATGGTGGTATACTATCCAAACTTGCCCTGCATTTTCCTCTTGTTTTTAGCTTTTGGGGAAGACATAGTGTGCAACAAAATGTCTCTGGGAAAGAGGATGCGGTATCTTCTCATGAAATGATGAGATCTTATAGCATTGATGAGAGGGAAAATATAGTTATTCCCAGTACTGTTAATGACAGATTTGACAAGCAGTATCCAGAGTTGGAGCCAGACGCGAGCAACAACAGTTCAAAGTTGTCTGTTTCAAGGGATTCTGAAAAAAATGAAGATTCATTTGACAATATAGCCAATTCTCCTATCCCTTATGATTCCATTAACGAAGAAGGCGAATGTGCTTTTCAGAGGGAACAACTTGGAAACTGGAATCTGGGCCCTGGATTTGAAGTGGCAAAAGAATGGGCCCAAGAAAGGGAAGCTGATGTTACACCAGTGGTTGATAGCCTAAGCATATTCCACCTTCCTGTTGGTGTTAGGCCTTCAGAAGAGTTGAAAGACAGTTTAGAAATCTCATTTATGTCAAAAAAGCATGAGCCAGATTCAGGTGTGGAAGCAGTGAAGGAATTTACATCTTCACTTCTGAAGCCAAAACATGCTAATAGCAATAAGCCAAAGAAGCATGGTGTTTTGTCTGTTCGTGCTGCATCTATGCTGGAGGCAGAACGTGATTTGTCAATGAAGTGGAGTCCTGTTGTGGAAATACAATATAGGGGAGGAAGATACAAGGGGCGATGCCAAGGTGGTCTGCCTGAAGGGAAGGGGCGTCTTGTTCTTCGAGATGGAAATATCTATGATGGTTCATGGCACAGTGGCAAGAGATCAGGTGCAGGAACATTCTATTTCAAGAACGGAGATATGTTTCAAGGATCATGGAGGGATGATGCCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTCTGGAAGGGAAAGGCAAATGGAGAGGGGCGGTTTTACACAAAGTCTGGTGATGCCTTCTTCGGCAATTTCAAAGACGGATGGCGGCATGGCCAATTTCTTTGTGTGAATGCAAATGGAACGAGAGGGAGTATATTTCTTCGCCAAACTTATATTTACCGCCCTTTAAGTCTTCATTCTGCTATAGATATGACATTGACATTGAGAGGTAAAATAAGTTTTGTTGAAGGACCTTAA 2304 0.4145 MELSAFPNFKLVSNSSIFHSTSNQFHSRYSLSLRHYHYGFRCRNSKQVPQIRMCSEKLPLSNGYGGVEIRETNSDFVEVIAIGGRKDAVLDFCFNSQFQLSSLRFWNVIVKDSQEAQLQQRPTKEEPCSGIVKAPVFMKSCSKTIVLVASAGYGSDHTVAVDIFETVRSTNGLTVAVVLKPFSFEGLRRKDEVNALMGKLKKNTNLLIEIDIDALLKKDLLTLDEAMKTANDAVLLAIKAISVLKSEIHRKFIDRLHNSMKEASNSEIIKILECYKEARIGFGAAYNIKTSILQSIFDSPFLGASLKDPNSAVICIIACSEPINDSDKAVFLRTFRQTTEYTRDIIISTVLEPDVEPNLLITTVLTLGLTVQQPSPNGGILSKLALHFPLVFSFWGRHSVQQNVSGKEDAVSSHEMMRSYSIDERENIVIPSTVNDRFDKQYPELEPDASNNSSKLSVSRDSEKNEDSFDNIANSPIPYDSINEEGECAFQREQLGNWNLGPGFEVAKEWAQEREADVTPVVDSLSIFHLPVGVRPSEELKDSLEISFMSKKHEPDSGVEAVKEFTSSLLKPKHANSNKPKKHGVLSVRAASMLEAERDLSMKWSPVVEIQYRGGRYKGRCQGGLPEGKGRLVLRDGNIYDGSWHSGKRSGAGTFYFKNGDMFQGSWRDDAMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCVNANGTRGSIFLRQTYIYRPLSLHSAIDMTLTLRGKISFVEGP 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03472 767 Pfam MORN repeat 640 662 IPR003409 -
Vivi1g03472 767 Pfam MORN repeat 622 638 IPR003409 -
Vivi1g03472 767 Pfam MORN repeat 710 721 IPR003409 -
Vivi1g03472 767 Pfam MORN repeat 663 685 IPR003409 -
Vivi1g03472 767 Gene3D - 619 668 - -
Vivi1g03472 767 Gene3D - 669 733 - -
Vivi1g03472 767 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 101 730 - -
Vivi1g03472 767 MobiDBLite consensus disorder prediction 442 480 - -
Vivi1g03472 767 PRINTS Cell division protein FtsZ signature 172 193 IPR003008 GO:0005525
Vivi1g03472 767 PRINTS Cell division protein FtsZ signature 266 287 IPR003008 GO:0005525
Vivi1g03472 767 Gene3D Tubulin/FtsZ, GTPase domain 115 368 IPR036525 -
Vivi1g03472 767 SMART morn 615 636 IPR003409 -
Vivi1g03472 767 SMART morn 638 659 IPR003409 -
Vivi1g03472 767 SMART morn 661 682 IPR003409 -
Vivi1g03472 767 SMART morn 707 728 IPR003409 -
Vivi1g03472 767 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 614 731 - -
Vivi1g03472 767 SUPERFAMILY Tubulin nucleotide-binding domain-like 79 243 IPR036525 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03472 Vivi-Chr1 74311492 74321376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03472 75 733 PP2C-type Phosphatase Gene Family AT1G75010 47.515 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03472 - - gsj:114371951 1017.68