Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03436 ATGGGAAAGAAAAATTTGAAACTTTCTTCACTTTTCAAAACCAAACAACATCCATGGCAATTCTTACCTTCCTGCAACCACCATCCAAAGACTCTCTCCTTTCGAACTGGTGGTGCCATTGTTGATGATGACATGTTCAAGACAGTTAACTCAGTGTTCTTCGACCAAACAGACAATCAAAGCAATATCGAAACACCGAAATCATGTTTCACAACAACCTCGTCTGATTCTGTCGCGAGTTTCTCGACAGAATCAGACGAGTATTATTGCTACAACGACGGAGAGCTCTTGGAGACATTAGTACGAGGAGTTAAATCCGAGAGGTCTTCAGAGAGACTGTTTTTCGAAGCCGAGGACACGAGTTCGATCTTGGAAAAGGCGAAGGCCAACGGTTTTCCGTTTAAGGAAAGTGTGGTATTAGCTTTGGAGTCAGATGATCCTTATGAGGATTTCAAGAGATCAATGGAGGAGATGGTTGAGTCACATGGTGTGAAGGATTGGGAAGGGTTGGAGGAGCTTTTGAGTTGGTATTTGAGAGTTAATGGGAAAAATAATCATGGGTTTATTGTTGGTGCTTTTGTTGATTTGTTGATTAGTTTGACAGGCTCTAAGGATTCTAGTAAGTCTTGTTCTGATTTAACTTTGTATTCTTCTGCTGTTTCTTCTTTTGCTTCTTCACCAACTTTGTATTTATCTGAGGGGCAGAATGAGATTACTGAGATTGAAGATAATGATAATGTAACAGATTCTTAG 753 0.4011 MGKKNLKLSSLFKTKQHPWQFLPSCNHHPKTLSFRTGGAIVDDDMFKTVNSVFFDQTDNQSNIETPKSCFTTTSSDSVASFSTESDEYYCYNDGELLETLVRGVKSERSSERLFFEAEDTSSILEKAKANGFPFKESVVLALESDDPYEDFKRSMEEMVESHGVKDWEGLEELLSWYLRVNGKNNHGFIVGAFVDLLISLTGSKDSSKSCSDLTLYSSAVSSFASSPTLYLSEGQNEITEIEDNDNVTDS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03436 250 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 42 200 IPR038933 GO:0045892
Vivi1g03436 250 NCBIfam uncharacterized plant-specific domain TIGR01568 139 201 IPR006458 -
Vivi1g03436 250 ProSiteProfiles OVATE domain profile. 140 199 IPR006458 -
Vivi1g03436 250 Pfam Transcriptional repressor, ovate 144 200 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03436 Vivi-Chr1 73877367 73878348 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi1g03436 Ovate 5.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03436 - - mtr:25485550 383.259