Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03433 ATGAATCCAGAACTCCCAACACCCCCATCAACCAACCAACCCCAACAACAACAAAAATTCTCCCTTCAAGTAGACTCAGAAAACAAATCCACAGAATTCAAAATCCACTCAATAGCCAAACCTCACATGCTAGCATTCCACCTCTCATGGTTCTCATTCTTTGCATGTTTCGTTTCAAGCTTTGCAGCAGCACCACTTGTCCCTATAATCCGCGACAACCTTAACCTCACAGCAACAGACATAGGAAATGCCGGCGTAGCCTCCGTCTCCGGCGCCGTTTTCGCAAGAATCGCAATGGGAACAGCTTGTGACCTAGTCGGTCCCCGTCTTGCTTCCGCTTCTCTCATTCTCTTAACCTCACCAGCAGTTTACTTCACCTCCATCATTGATTCTCCTACAAGCTTTCTCCTCGTCCGTTTCTTCACCGGCTTTTCTTTAGCCACGTTTGTTTCTACTCAGTTTTGGATGAGTTCCATGTTCTCCACCACCGTCGTTGGTAGAGCAAACGGTTTCTCCGGTGGCTGGGGTAACCTCGGTGGCGGCGCAACACAACTCATCATGCCACTCGTGTTTTCTCTCATTCAAAACATTGGTTCAACAAAATTCACTGCATGGAGAATAGCTTTTTTCATACCTGCTTTTCTACAAACCATGACAGCGTTTTCGATACTAATATTCGGACAAGATTTACCTGACGGAAACTTTCATGGCTTGAAAAAATCAGGTGAGAAAGCGAAAGATGAATTCTCAAAAGTGCTTTACCATGGTGTGTTGAATTATAGAGGCTGGATTTTAGCTTTGACTTATGGATATTGTTTTGGAGTGGAGTTGACTGTGGATAATATCATAGCTGAGTATTTTTACGACAAGTTTAACCTTAATCTTCGAACTGCTGGAATCATTGCTGCAAGTTTTGGTTTGGCTAATGTTTTTTCTAGACCTGGAGGAGGGTTTATTTCTGATTTGATGGCGAAGAGATTTGGAATGAGGGGGAGGTTGTGGTGTCTGTGGATTTGTCAAACGTTGGCTGGTGTTTTTTGTGTGGTTTTGGGACTTGTTGGATCTTTGAATGTTTCTGTTGTTGTTATGATTATTTTCTCTGTGTTTGTTCAAGCTGCTTGTGGAATGACCTTTGGAATTGTTCCTTTTGTCTCAAGAAGGTCATTAGGAGTAATATCAGGAATGACAGGAGGAGGAGGAAACGTAGGAGCAGTTATAACCCAACTAGTATTCTTCAAAGGATCAAGGTTTTCAAAAGAAAGAGGAATAACACTAATGGGTGCAATGATCATAATATGCACTCTACCATTATTCTTAATATATTTTCCACAATGGGGTGGCATGTTATTTGGTCCATCTTCATCTAAAAATGTCTCTGAAGAAGATTATTATTTGTCTGAATGGAACTCCAAGGAAAGAGAGAAAGGCTCTCATCATGGAAGCTTGAAATTTGCTGATAATAGTAGAAGTGAAAGGGGTAGAAAATTTAATATTTCAACTAGGCCTTCTGAGGATGTCACACCACCACAACAACATGTTTGA 1542 0.4157 MNPELPTPPSTNQPQQQQKFSLQVDSENKSTEFKIHSIAKPHMLAFHLSWFSFFACFVSSFAAAPLVPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASASLILLTSPAVYFTSIIDSPTSFLLVRFFTGFSLATFVSTQFWMSSMFSTTVVGRANGFSGGWGNLGGGATQLIMPLVFSLIQNIGSTKFTAWRIAFFIPAFLQTMTAFSILIFGQDLPDGNFHGLKKSGEKAKDEFSKVLYHGVLNYRGWILALTYGYCFGVELTVDNIIAEYFYDKFNLNLRTAGIIAASFGLANVFSRPGGGFISDLMAKRFGMRGRLWCLWICQTLAGVFCVVLGLVGSLNVSVVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVITQLVFFKGSRFSKERGITLMGAMIIICTLPLFLIYFPQWGGMLFGPSSSKNVSEEDYYLSEWNSKEREKGSHHGSLKFADNSRSERGRKFNISTRPSEDVTPPQQHV 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03433 513 CDD MFS_NRT2_like 46 439 IPR044772 GO:0015112
Vivi1g03433 513 MobiDBLite consensus disorder prediction 471 513 - -
Vivi1g03433 513 Gene3D MFS general substrate transporter like domains 244 446 IPR036259 -
Vivi1g03433 513 ProSiteProfiles Major facilitator superfamily (MFS) profile. 45 445 IPR020846 GO:0022857
Vivi1g03433 513 Pfam Major Facilitator Superfamily 50 406 IPR011701 GO:0022857|GO:0055085
Vivi1g03433 513 Gene3D MFS general substrate transporter like domains 37 234 IPR036259 -
Vivi1g03433 513 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 11 495 IPR044772 GO:0015112
Vivi1g03433 513 MobiDBLite consensus disorder prediction 1 23 - -
Vivi1g03433 513 SUPERFAMILY MFS general substrate transporter 32 441 IPR036259 -
Vivi1g03433 513 FunFam High affinity nitrate transporter 2.5 38 234 - -
Vivi1g03433 513 MobiDBLite consensus disorder prediction 471 499 - -
Vivi1g03433 513 FunFam Nitrate transporter 2.1 246 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03433 Vivi-Chr1 73768735 73771518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03433 18 494 Inorganic Solute Cotransporters AT1G12940 72.117 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03433 K02575 - gmx:100787888 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03433 1 73768735 73771518 Vivi1g03433 1 73768735 73771518 ECH