Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03413 ATGAGGGGTGACAAAAACAGGAAGCTACATTTAAGCAAGATCTATTCATTCACGTGTTTCAGAGCGAGTTCGGTTGATGGTGGAGATCATTCACAAATTGGAAGTAGAGGCTATTCAAGGGTGGTGTTGTGCAATGAACAAAACAGTACTAATGATGAGGAAGCTGTGATTAAGAATTTTGCAGATAATTCTGTCAGATCTACGAAATATACTGCTGTTACTTTTCTTCCAAAATCACTTTTTGAACAGTTTAGAAGAGTTGCTAATTTCTATTTTTTGGTTACTGGTGTTTTGGCTTTCTCTAAACTTGCTCCTTTTAAAGCTAGTACTGCTATTTTTCCTCTTGTTGTTGTTATTGGGGCAACTATGGTGAAAGAAGGTATTGAAGATTGGCGTAGGAAAAAGCAGGATATCGAGGTGAATAATAGAAGAGTTAAAGTTCATAAAGTTGATGGAATTTTTGAATATACTGCATGGAAGAATCTGAAGGTAGGGAATATAGTGAAGGTAGAGAAAGATGAGTTTTTTCCAGCAGATCTTGTATTGCTTTCATCGAGTTTTGAGGATGCCGTCTGCTACGTGGAGACGATGAACTTGGACGGTGAGACAAATTTGAAGTTAAAACAAGGTTTAGAAGCAACTTCTTCGTTACATGACGATCTCAACTTCAAAAAATTTAAAGCGACTGTTAAATGTGAAGATCCAAATGCAAATTTATACTCGTTTGTTGGTAGTATGGAGTTTGGAGTGCAAAAATATGCCCTTTCTCCTCAGCAACTTCTTTTGCGAGACTCTAAGCTTCGTAATACAGACTATATTTTTGGAGCTATCATTTTCACCGGTCATGACACTAAGGTTATTCAGAATTCTACTGATCCACCTTCGAAGAGAAGCCGAGTTGAGAAGAAGATGGATAGAGTCATCTACTTTTTGTTTTGTATTTTGTTTCTAATGGCATCTGTAGGATCTATTTTCTTTGGCTTTATTACTAAAGACGACTTGCAAAAAGGGGTGGTGAAAAGATGGTATTTAAGGCCTGATAATTCTACAATTTACTTTGATCCGAAAAGACCGGCTGCGGCTGCTGCATTACATTGTTTGACAGCCTTAATGTTATACGGCTTCTTTATTCCAATCTCTTTGTATGTGTCAATAGAAATTGTCAAAGTCCTTCAGAGCATTTTCATCAATCAAGACATCCATATGTACTACAATGAAGCAGACAAACCAGCACATGCTCGCACTTCAAACTTGAACGAGGAGCTCGGTCAAGTTGACACGATACTTTCCGATAAAACTGGAACTTTGACCTGCAACTCCATGGAATTCATCAAATGTTCGATCGCTGGCGTAGCCTATGGTCGTGGTGTTACAGAGGTTGAGAAGACTATGAGTAGAAGAAAAGGTTCAACATTAGTTCGTGAGCGTGATATCTCAGAAGATGGCATCAACGATTCGCTTGATAATAAAAAAGTCATAAAAGGTTTTAACTTTACTGATGAAAGAATAATGAATGGAAATTGGGTAAATGAGCCTCATGCAGATATTATCCAGAAGTTTTTTCGCCTTTTAGCAGTCTGTCATACAGCCTTACCAGAAGTAGATAAAGAAACAGGAAATGTGTTGTACGAGGCTGAATCTCCAGATGAAGCCGCATTTGTTATTGCGGCGAGAGAACTTGGTTTTGAATTCTACAAAAGGGCTCAGACTAGTTTATCGACATACGAGTTGGATCCAGTTTCTGGCAAGAAAATTGAAAGGGTGTACAAGATTCTCAATGTATTAGAATTCAATAGCTCAAGGAAGAGAATGTCGGTAATAGTAAAGGACGATGGAGGAAAAATTCTACTACTCTGCAAAGGCGCTGACAGTGTCATGTTTGAAAGACTTGCCAAGAACGGGAGGGAGTTTGAAGAGAAAACCGTGGAACATGTGCATGAATATGCTGATGCAGGTCTCCGAACCCTTATACTTGCCTATCGTGAACTTGAAGCAGAAGAATACAAGGAGTTCGATACCAAATTCTCGGAGGCCAAGAATTTGGTTAGTGCAGATCGTGAAACATCGATTGAGGAAGTTTCGGATAATATGGAGAAGAACCTAATTCTTCTCGGTGCTACTGCTGTAGAGGACAAACTCCAAAATGGGGTTCCTGATTGTATTGACAAGCTTGCCCAAGCAGGAATTAAGATTTGGGTTTTGACTGGGGATAAAATGGAGACCGCAATCAATATTGGGTTTGCTTGTAGTTTGCTTAGACAAGGAATGAAACAGATTATAATTCATTTGGATAGTCCAGAAATTCAAGCATTGGAGAAAGATGGGGACAAGAGAGCTATTACCAAGGCATCAAGGCAGAGTATCCTGTTTCAGATACGTGAAGGTGCTGCACAGCTTATTGCTCACAAAGGGAACTCTCCGCAGACATTTGCTCTAGTAATTGATGGTAAATCACTTGCTTATGCACTTGAGGATGATATGAAGAACATGTTCTTGGAGCTTGCAATTCGTTGTGCATCTGTTATTTGCTGTCGCTCATCGCCAAAGCAGAAGGCACTGGTCACTAGATTAGTCAAATCTGGAACTGGTAAAACTACGTTAGCTATTGGCGATGGAGCAAATGATGTTGGAATGCTTCAAGAAGCTGATATCGGGGTTGGTATAAGTGGCGTCGAAGGAATGCAGGCTGTTATGTCTAGTGACATTGCAATTGCACAATTCCGATATCTGGAACGGTTACTTCTGGTGCATGGGCATTGGTGTTACCGAAGGATTTCAACGATGATATGCTATTTTTTCTACAAGAACATCACATTTGGTTTCACTCTATTCTTGTATGAGGTGTATGCATCATTCTCAGGACAACCTGCATACAACGACTGGTTTTTAGCTCTCTATAATGTCTTTTTTTCATCACTTCCCGTGATTGCTCTCGGTGTATTTGACCAAGACGTATCGGCTCGGTACTGCCTCAAGTTTCCTTTGTTATATCAAGAAGGAGTACAAAACGTCCTTTTCAGCTGGCGTCGAGTACTCAGCTGGATGCTTAACGGATTCTTCAGCGCCTTATTAATTTTCTTCTTCTGCACAAAGGCAATGGAGCTACAAGCCTTCGATTCAGAGGGAAGAACTGCCGGAAGAGATATACTAGGAACAACCATGTACACTTGTGTAGTTTGGGTTGTAAACTTGCAAATGGCAGTAGATATAAGTTACTTCACCTTGATCCAACATTTTTTCATCTGGGGTTCCATATTTTTCTGGTACATTTTTCTCCTAATATATGGAGCATTGCCTCAAAAGTTTTCGGGAAATGCTTACAAAGTCTTTGTTGAAGCTCTTGCTCCTTCGCCTTCCTATTGGATATTAACATTCTTTGTGGTCATCTCAACCCTAATGCCATACTTCTCATACAAAGCAATTCAGATGCGGTTCTTTCCGATGTATCATGAAATAGTACAGTGGATAAGATACGAAGGGAAGACCGAGGATCCCGAGTACTGTGATATGGTACAGACAAAATTGTCGCAGCAAACAACTTTTGGTTCAACAGCTCGCTTAGCGGCCAAGGCTAACCAATCGTCAGATAAAACTACTATTAACCGTAGAAAGTGTTTATTTCATCATTAA 3630 0.3978 MRGDKNRKLHLSKIYSFTCFRASSVDGGDHSQIGSRGYSRVVLCNEQNSTNDEEAVIKNFADNSVRSTKYTAVTFLPKSLFEQFRRVANFYFLVTGVLAFSKLAPFKASTAIFPLVVVIGATMVKEGIEDWRRKKQDIEVNNRRVKVHKVDGIFEYTAWKNLKVGNIVKVEKDEFFPADLVLLSSSFEDAVCYVETMNLDGETNLKLKQGLEATSSLHDDLNFKKFKATVKCEDPNANLYSFVGSMEFGVQKYALSPQQLLLRDSKLRNTDYIFGAIIFTGHDTKVIQNSTDPPSKRSRVEKKMDRVIYFLFCILFLMASVGSIFFGFITKDDLQKGVVKRWYLRPDNSTIYFDPKRPAAAAALHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYNEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKTMSRRKGSTLVRERDISEDGINDSLDNKKVIKGFNFTDERIMNGNWVNEPHADIIQKFFRLLAVCHTALPEVDKETGNVLYEAESPDEAAFVIAARELGFEFYKRAQTSLSTYELDPVSGKKIERVYKILNVLEFNSSRKRMSVIVKDDGGKILLLCKGADSVMFERLAKNGREFEEKTVEHVHEYADAGLRTLILAYRELEAEEYKEFDTKFSEAKNLVSADRETSIEEVSDNMEKNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLDSPEIQALEKDGDKRAITKASRQSILFQIREGAAQLIAHKGNSPQTFALVIDGKSLAYALEDDMKNMFLELAIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISTMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLALYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRVLSWMLNGFFSALLIFFFCTKAMELQAFDSEGRTAGRDILGTTMYTCVVWVVNLQMAVDISYFTLIQHFFIWGSIFFWYIFLLIYGALPQKFSGNAYKVFVEALAPSPSYWILTFFVVISTLMPYFSYKAIQMRFFPMYHEIVQWIRYEGKTEDPEYCDMVQTKLSQQTTFGSTARLAAKANQSSDKTTINRRKCLFHH 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03413 1209 FunFam Phospholipid-transporting ATPase 546 704 - -
Vivi1g03413 1209 FunFam Phospholipid-transporting ATPase 704 909 - -
Vivi1g03413 1209 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 436 674 IPR023299 GO:0000166
Vivi1g03413 1209 PRINTS P-type cation-transporting ATPase superfamily signature 429 443 - -
Vivi1g03413 1209 PRINTS P-type cation-transporting ATPase superfamily signature 869 888 - -
Vivi1g03413 1209 SUPERFAMILY Calcium ATPase, transduction domain A 146 288 IPR008250 -
Vivi1g03413 1209 Gene3D - 705 909 IPR023214 -
Vivi1g03413 1209 Gene3D - 121 291 - -
Vivi1g03413 1209 SFLD p-type atpase 411 920 IPR044492 -
Vivi1g03413 1209 Gene3D - 560 704 IPR023299 GO:0000166
Vivi1g03413 1209 SFLD C1.7: P-type atpase like 411 920 - -
Vivi1g03413 1209 CDD P-type_ATPase_APLT_Dnf-like 62 1029 - -
Vivi1g03413 1209 Pfam Phospholipid-translocating P-type ATPase C-terminal 897 1147 IPR032630 -
Vivi1g03413 1209 SUPERFAMILY HAD-like 424 924 IPR036412 -
Vivi1g03413 1209 Pfam Phospholipid-translocating ATPase N-terminal 51 112 IPR032631 -
Vivi1g03413 1209 NCBIfam phospholipid-translocating P-type ATPase 60 1154 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vivi1g03413 1209 FunFam Phospholipid-transporting ATPase 121 291 - -
Vivi1g03413 1209 Pfam Cation transport ATPase (P-type) 536 630 - -
Vivi1g03413 1209 NCBIfam HAD-IC family P-type ATPase 840 951 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi1g03413 1209 ProSitePatterns E1-E2 ATPases phosphorylation site. 431 437 IPR018303 -
Vivi1g03413 1209 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 47 1160 - -
Vivi1g03413 1209 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 1147 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03413 Vivi-Chr1 73485899 73492941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03413 9 1190 Primary Pumps ATPases AT1G68710 73.493 0.0 1861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03413 K01530 - gmx:100781421 2028.06