Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03405 ATGACATCTCAGATCCTTCCCATAACCAATCATCAAACACCTAACCTTCATTCTTCTTCTGCTTCCACCATTTCAATGTTGCTTAAATACGACGACCAAGAAAACCCAACCACGAGTCTCTTACACTCTTCCTCATTCAAAAACAACAACATGTCGATTAAGCCTCTTCTACCGAGGTCTTCCAGCTTCAACTCCTCAATCAATAACAACAACTCAATTGGCGCTGTTCCTAATTTCTTTCAGAAAACACGAAGGCGCGTTGCGAGTGAGGATTCACTGGCTTGTGTTTCTAATGGTAGTTCGCATAGATCTTCATTTGGCAATGATGTTAGACACGCTGCTTCGGAAACGTTTCTGCTGACTCGTCTTGGATTGAAGATGTTGACGTATCTTGGGGTAGGCTATAGATGGATTACAAGATTTCTTGCCCTTGGTTGTTATTCTTTACTGCTTTTACCAGGCTTTATTCAAGTTGGATATCATTATTTTTTCTCCAGTGAAATACGCAGAAGTATAGTTTATGGAGATAAACCACGTAATAGGCTAGACTTGTTTTTGCCTAAAAACAGTGACGGGCCAAAACCAGTTGTTGCTTTCATTACTGGTGGAGCCTGGATTATTGGATACAAAGCATGGGGTTCTCTTTTAGGTCAACAGCTTTCGGAGAGAGATATCATTGTGGCATGCATAGATTATAGAAATTTTCCTCAGGCAACCATCAGTGATATGATAGATGATGCTTCCCAAGGTATCTCATTTGTATGCAACAATATTGCTGAATATGGAGGTGACCCTAACAGAATTTACATAATGGGACAATCAGCTGGAGCACATATTGCGGCATGTACAATCTTGGAGCAGGCAATCAAAGAGGCTGGTGAAGGAGAGACTACTTGGAGTCTTTCTCAGATTAAAGCTTATTTTGGTTTATCTGGAGGGTATAACTTGTTTAATCTAATAGACCACTTCCACAGTAGAGGCCTCTATCGTTCCATCTTTTTAAGCATAATGGAAGGAGAGGAATCAATACGGAGGTTTTCTCCTGAAGTAATGGTTCAAGATCCAAACATTGGAAATGCTGTTTCTCTAATACCCCCTACAGTTCTTTTCCATGGCACCGGAGATTATTCCATACCATCAGATCAAAGCAAATCATTTGCTGAAACTCTTAAAAGATTTGGAGTCAAAGCTGAATCAATTTTATATGAAGGGAAGACTCATACAGATGTGTTTCTACAGGATCCTATGAGGGGTGGAAAAGATGATATGTTTGATGATTTAGTAGCATATATTCATGCCGGCGATCCTGAGGCTCTTTCTAGAGATGCAACGGCTCCTCCAAGAAGACGACTTGTACCAGAATTCATGTTAAAGTTGGCTCATTCTGTCAGTCCTTTCTAA 1401 0.4033 MTSQILPITNHQTPNLHSSSASTISMLLKYDDQENPTTSLLHSSSFKNNNMSIKPLLPRSSSFNSSINNNNSIGAVPNFFQKTRRRVASEDSLACVSNGSSHRSSFGNDVRHAASETFLLTRLGLKMLTYLGVGYRWITRFLALGCYSLLLLPGFIQVGYHYFFSSEIRRSIVYGDKPRNRLDLFLPKNSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQATISDMIDDASQGISFVCNNIAEYGGDPNRIYIMGQSAGAHIAACTILEQAIKEAGEGETTWSLSQIKAYFGLSGGYNLFNLIDHFHSRGLYRSIFLSIMEGEESIRRFSPEVMVQDPNIGNAVSLIPPTVLFHGTGDYSIPSDQSKSFAETLKRFGVKAESILYEGKTHTDVFLQDPMRGGKDDMFDDLVAYIHAGDPEALSRDATAPPRRRLVPEFMLKLAHSVSPF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03405 466 Gene3D alpha/beta hydrolase 164 416 IPR029058 -
Vivi1g03405 466 SUPERFAMILY alpha/beta-Hydrolases 160 437 IPR029058 -
Vivi1g03405 466 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 164 415 - -
Vivi1g03405 466 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 86 425 - -
Vivi1g03405 466 Pfam BD-FAE 182 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03405 Vivi-Chr1 73324956 73331507 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03405 1 466 Carbohydrate Esterase AT1G26120 66.119 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03405 K15889 - qsa:O6P43_032814 697.197