Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03383 ATGGACCCTAATCAATATAATTTTCAACAATCTATGTTCCATCTCATGCAAAATCAGCAAAATTCTAATCCGCAAAATTCTCAATTTCCCCCACCGCCAATAAACTCTACCGTATTTTTTCCGCCACCAAACAACCCAAATATTTATTTTAGACCACAGATAAATACTCATGGGGTGAATTTTTCTCTTCATGAACCCGAAACACCAAATGGGTTTATGTCTGAACGTCAAGTTCCACAATTTTCAACTCAAGTTGGTATTGAAAATACTACAATTGAAAAAGAACAAAGGCGTTCTGTTAAAAAAAAAAAACCTAGAGAGGTATTCACAAGGGAAGAGGATACACTTCTTATGCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAAGTTGATAGCTTTTGGTGTTACAAACAAGCTGTTTATGGAAAAAAAAGTGGGGCATCAGAGAAAGATATCTTAATCAATGCGCATGCTTTTTATGAACAAGATGAAGGTGCACCATTCAATCTTGAGTATGCATGGCGGCTTTTAAATGATGAACCTAAATGGATGGGAGAATCCACCGAAAATTCTTCAAAGAGAACAAAGAATTCTGTTAGCGGTTCATACACGGCATCGCTAAATTCAGAGACACCTTCAAGTTATGAGTTAAACTCATCATCTCTAATGGAGCGTCCAATGGGACAAAAGGCGGCAAAACGAAAAGGTAAGGCAAAGGAAAATGCAAATGCAATTGAACCTCCTTCTAGTGTTATTTCCGATACAAGGAATAAAAGAATGGAAGTAATGGAAAATCTAGCACGACTTAAGGAGGAAGAAAACAAATTAGTCAAGGAAAAGATGGAGTTTGAAGCAATGCAATTCATAATGTCAGACACTTCTAAGATGAATGATAGTCAACGTGAATTTCATGAAAAACGTTGTAATAGCCTAAAAGAAAAATATGGATGGTAA 972 0.3611 MDPNQYNFQQSMFHLMQNQQNSNPQNSQFPPPPINSTVFFPPPNNPNIYFRPQINTHGVNFSLHEPETPNGFMSERQVPQFSTQVGIENTTIEKEQRRSVKKKKPREVFTREEDTLLMQSWLNVSKDPIVGVDQKVDSFWCYKQAVYGKKSGASEKDILINAHAFYEQDEGAPFNLEYAWRLLNDEPKWMGESTENSSKRTKNSVSGSYTASLNSETPSSYELNSSSLMERPMGQKAAKRKGKAKENANAIEPPSSVISDTRNKRMEVMENLARLKEEENKLVKEKMEFEAMQFIMSDTSKMNDSQREFHEKRCNSLKEKYGW 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03383 323 MobiDBLite consensus disorder prediction 303 323 - -
Vivi1g03383 323 MobiDBLite consensus disorder prediction 191 231 - -
Vivi1g03383 323 MobiDBLite consensus disorder prediction 191 257 - -
Vivi1g03383 323 Pfam No apical meristem-associated C-terminal domain 173 312 IPR029466 -
Vivi1g03383 323 Coils Coil 258 292 - -
Vivi1g03383 323 PANTHER - 79 318 - -
Vivi1g03383 323 MobiDBLite consensus disorder prediction 302 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03383 Vivi-Chr1 72816497 72817581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03383 77 279 Glutathione S-transferase Gene Family AT5G41240 27.907 1.14e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03383 - - vvo:131607299 501.516