Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03378 ATGAGTAGCAGTGACGTAGACAAATCGTTAAAAGAAAAGGAGCCGAAGACTCCTCCAGTGGCTACATCACAGGAGCAGTCTTCAACGGCAACTGGCACTCCGGCAGTTAATCCTGAATGGGCTAACTATCAGGCATATTCTCCTATACCTCCACCTGGATACATGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGCACCCCACCACATCCTTATGTTGCAATGTATCCCCATGGTGGCTTATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTATGCCATGCCTTCTCCAAATGGTATGGTGGATGCTTCAGGAAATACTCCAGGCAGCAGTGAAGCTGATGGTAAACCTCATGAGGTGAAGGAAAAATTACCAATCAAAAGATCAAAAGGAAGTATGGGTAGTTTGAATATGGTTACAGGAAAAAATAATGAACTCGGTAAAACACCAGGGGCATCTGCCAATGGAATTCATTCCAAAAGTGGTGAAAGTGCAAGTGAAGGCACTAGTGAAGGAAGCGATGAAAACTCCCACAATGATTCTCAATTGAAATCCGGGGAGAGGCAAGATTCTTTTGAAGATGAGCCGTCTCAAAATGGAAGTTCAGCGCATGCGCCTCAAAATGGGGTACTTAATACACCTCATACAGTCGTTAACCAGACTATGTCTGTCGTGCCTATGTCTGTTGCTGGTCCTCTCGCAGCAGTTCCTGGTCCCACTACTAATTTAAATATAGGAATGGATTTCTGGGGAACTCCAGCTTCATCCACCGTTCCTGCAATGCATGGAAAGGATGAAAGGGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGTAGATCCAGGTTGCGAAAGCAGGCTGAATGTGATGAATTAGCTCAGCGTGCTGATGTTTTGAGTGAAGAAAATGCCTCTCTCCGTGCTGAACTAAGCCGGATCAAGAGTGAGCACGCGAAGGCACTTGCTGAGAATGCAGCCCTCAAGGCGAAACAGGGGGAGATACCGAGGAACGAGGATATCGTGCCGGGCCAGAATGATCAGCATGTGGAGCATGTGGGTGGAGGAGACACTAAACAAAGTGGTTAG 1143 0.4716 MSSSDVDKSLKEKEPKTPPVATSQEQSSTATGTPAVNPEWANYQAYSPIPPPGYMASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGLYAHPSMPPGSYPFSPYAMPSPNGMVDASGNTPGSSEADGKPHEVKEKLPIKRSKGSMGSLNMVTGKNNELGKTPGASANGIHSKSGESASEGTSEGSDENSHNDSQLKSGERQDSFEDEPSQNGSSAHAPQNGVLNTPHTVVNQTMSVVPMSVAGPLAAVPGPTTNLNIGMDFWGTPASSTVPAMHGKDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLSEENASLRAELSRIKSEHAKALAENAALKAKQGEIPRNEDIVPGQNDQHVEHVGGGDTKQSG 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03378 380 MobiDBLite consensus disorder prediction 1 15 - -
Vivi1g03378 380 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Vivi1g03378 380 CDD bZIP_plant_GBF1 286 337 IPR045314 GO:0003700|GO:0006355
Vivi1g03378 380 MobiDBLite consensus disorder prediction 113 228 - -
Vivi1g03378 380 MobiDBLite consensus disorder prediction 129 143 - -
Vivi1g03378 380 MobiDBLite consensus disorder prediction 19 36 - -
Vivi1g03378 380 SUPERFAMILY Leucine zipper domain 284 337 IPR046347 GO:0003700|GO:0006355
Vivi1g03378 380 MobiDBLite consensus disorder prediction 269 308 - -
Vivi1g03378 380 MobiDBLite consensus disorder prediction 1 36 - -
Vivi1g03378 380 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 335 IPR004827 GO:0003700|GO:0006355
Vivi1g03378 380 MobiDBLite consensus disorder prediction 188 209 - -
Vivi1g03378 380 Coils Coil 301 349 - -
Vivi1g03378 380 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Vivi1g03378 380 MobiDBLite consensus disorder prediction 276 290 - -
Vivi1g03378 380 MobiDBLite consensus disorder prediction 346 380 - -
Vivi1g03378 380 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
Vivi1g03378 380 PANTHER G-BOX-BINDING FACTOR 3-RELATED 15 358 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vivi1g03378 380 MobiDBLite consensus disorder prediction 210 228 - -
Vivi1g03378 380 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Vivi1g03378 380 Gene3D - 284 339 - -
Vivi1g03378 380 MobiDBLite consensus disorder prediction 148 187 - -
Vivi1g03378 380 Pfam Disordered region downstream of MFMR 137 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03378 Vivi-Chr1 72752820 72758532 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03378 1 380 bZIP Transcription Factor Family AT2G35530 58.780 2.69e-154 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1g03378 MFMR_assoc 1.5e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03378 K09060 - gmx:778122 569.696