Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03377 ATGAGTAGCAGTGACGTAGACAAATCGTTAAAAGAAAAGGAGCCGAAGACTCCTCCAGTGGCTACATCACAGGAGCAGTCTTCAACGGCAACTGGCACTCCGGCAGTTAATCCTGAATGGGCTAACTATCAGGCATATTCTCCTATACCTCCACCTGGATACATGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGCACCCCACCACATCCTTATGTTGCAATGTATCCCCATGGTGGCTTATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTATGCCATGCCTTCTCCAAATGGTATGGTGGATGCTTCAGGAAATACTCCAGGCAGCAGTGAAGCTGATGGTAAACCTCATGAGGTGAAGGAAAAATTACCAATCAAAAGATCAAAAGGAAGTATGGGTAGTTTGAATATGGTTACAGGAAAAAATAATGAACTCGGTAAAACACCAGGGGCATCTGCCAATGGAATTCATTCCAAAAGTGGTGAAAGTGCAAGTGAAGGCACTAGTGAAGGAAGCGATGAAAACTCCCACAATGTTTTGCAGGATTCTCAATTGAAATCCGGGGAGAGGCAAGATTCTTTTGAAGATGAGCCGTCTCAAAATGGAAGTTCAGCGCATGCGCCTCAAAATGGGGTACTTAATACACCTCATACAGTCGTTAACCAGACTATGTCTGTCGTGCCTATGTCTGTTGCTGGTCCTCTCGCAGCAGTTCCTGGTCCCACTACTAATTTAAATATAGGAATGGATTTCTGGGGAACTCCAGCTTCATCCACCGTTCCTGCAATGCATGGAAAGGTACCTTCTACTGCAGTTGCTGGAGGGATGGTTAATGCTGGGCCTAGAGATGGTGTTCATTCACAACCTTGGCTACAGGATGAAAGGGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGTAGATCCAGGTTGCGAAAGCAGGCTGAATGTGATGAATTAGCTCAGCGTGCTGATGTTTTGAGTGAAGAAAATGCCTCTCTCCGTGCTGAACTAAGCCGGATCAAGAGTGAGCACGCGAAGGCACTTGCTGAGAATGCAGCCCTCAAGGCGAAACAGGGGGAGATACCGAGGAACGAGGATATCGTGCCGGGCCAGAATGATCAGCATGTGGAGCATGTGGGTGGAGGAGACACTAAACAAAGTGGTTAG 1230 0.4732 MSSSDVDKSLKEKEPKTPPVATSQEQSSTATGTPAVNPEWANYQAYSPIPPPGYMASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGLYAHPSMPPGSYPFSPYAMPSPNGMVDASGNTPGSSEADGKPHEVKEKLPIKRSKGSMGSLNMVTGKNNELGKTPGASANGIHSKSGESASEGTSEGSDENSHNVLQDSQLKSGERQDSFEDEPSQNGSSAHAPQNGVLNTPHTVVNQTMSVVPMSVAGPLAAVPGPTTNLNIGMDFWGTPASSTVPAMHGKVPSTAVAGGMVNAGPRDGVHSQPWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLSEENASLRAELSRIKSEHAKALAENAALKAKQGEIPRNEDIVPGQNDQHVEHVGGGDTKQSG 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03377 409 MobiDBLite consensus disorder prediction 213 231 - -
Vivi1g03377 409 MobiDBLite consensus disorder prediction 1 15 - -
Vivi1g03377 409 MobiDBLite consensus disorder prediction 287 336 - -
Vivi1g03377 409 Gene3D - 313 368 - -
Vivi1g03377 409 SUPERFAMILY Leucine zipper domain 313 366 IPR046347 GO:0003700|GO:0006355
Vivi1g03377 409 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 312 364 IPR004827 GO:0003700|GO:0006355
Vivi1g03377 409 MobiDBLite consensus disorder prediction 129 143 - -
Vivi1g03377 409 MobiDBLite consensus disorder prediction 19 36 - -
Vivi1g03377 409 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 317 332 IPR004827 GO:0003700|GO:0006355
Vivi1g03377 409 MobiDBLite consensus disorder prediction 148 203 - -
Vivi1g03377 409 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Vivi1g03377 409 MobiDBLite consensus disorder prediction 113 231 - -
Vivi1g03377 409 MobiDBLite consensus disorder prediction 1 36 - -
Vivi1g03377 409 PANTHER G-BOX-BINDING FACTOR 3-RELATED 15 387 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vivi1g03377 409 SMART brlzneu 310 374 IPR004827 GO:0003700|GO:0006355
Vivi1g03377 409 MobiDBLite consensus disorder prediction 304 319 - -
Vivi1g03377 409 Pfam bZIP transcription factor 310 372 IPR004827 GO:0003700|GO:0006355
Vivi1g03377 409 MobiDBLite consensus disorder prediction 372 409 - -
Vivi1g03377 409 Pfam Disordered region downstream of MFMR 137 277 - -
Vivi1g03377 409 CDD bZIP_plant_GBF1 315 366 IPR045314 GO:0003700|GO:0006355
Vivi1g03377 409 Coils Coil 330 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03377 Vivi-Chr1 72752820 72758533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03377 1 409 bZIP Transcription Factor Family AT2G35530 61.928 1.49e-166 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1g03377 MFMR_assoc 4.4e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03377 K09060 - gmx:778122 615.15