Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03376 ATGAGTAGCAGTGACGTAGACAAATCGTTAAAAGAAAAGGAGCCGAAGACTCCTCCAGTGGCTACATCACAGGAGCAGTCTTCAACGGCAACTGGCACTCCGGCAGTTAATCCTGAATGGGCTAACTATCAGGCATATTCTCCTATACCTCCACCTGGATACATGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGCACCCCACCACATCCTTATGTTGCAATGTATCCCCATGGTGGCTTATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTATGCCATGCCTTCTCCAAATGGTATGGTGGATGCTTCAGGAAATACTCCAGGCAGCAGTGAAGCTGATGGTAAACCTCATGAGGTGAAGGAAAAATTACCAATCAAAAGATCAAAAGGAAGTATGGGTAGTTTGAATATGGTTACAGGAAAAAATAATGAACTCGGTAAAACACCAGGGGCATCTGCCAATGGAATTCATTCCAAAAGTGGTGAAAGTGCAAGTGAAGGCACTAGTGAAGGAAGCGATGAAAACTCCCACAATGTTTTGCAGGATTCTCAATTGAAATCCGGGGAGAGGCAAGATTCTTTTGAAGATGAGCCGTCTCAAAATGGAAGTTCAGCGCATGCGCCTCAAAATGGGGTACTTAATACACCTCATACAGTCGTTAACCAGACTATGTCTGTCGTGCCTATGTCTGTTGCTGGTCCTCTCGCAGCAGTTCCTGGTCCCACTACTAATTTAAATATAGGAATGGATTTCTGGGGAACTCCAGCTTCATCCACCGTTCCTGCAATGCATGGAAAGGATGAAAGGGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGTAGATCCAGGTTGCGAAAGCAGGCTGAATGTGATGAATTAGCTCAGCGTGCTGATGTTTTGAGTGAAGAAAATGCCTCTCTCCGTGCTGAACTAAGCCGGATCAAGAGTGAGCACGCGAAGGCACTTGCTGAGAATGCAGCCCTCAAGGCGAAACAGGGGGAGATACCGAGGAACGAGGATATCGTGCCGGGCCAGAATGATCAGCATGTGGAGCATGTGGGTGGAGGAGACACTAAACAAAGTGGTTAG 1152 0.4714 MSSSDVDKSLKEKEPKTPPVATSQEQSSTATGTPAVNPEWANYQAYSPIPPPGYMASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGLYAHPSMPPGSYPFSPYAMPSPNGMVDASGNTPGSSEADGKPHEVKEKLPIKRSKGSMGSLNMVTGKNNELGKTPGASANGIHSKSGESASEGTSEGSDENSHNVLQDSQLKSGERQDSFEDEPSQNGSSAHAPQNGVLNTPHTVVNQTMSVVPMSVAGPLAAVPGPTTNLNIGMDFWGTPASSTVPAMHGKDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLSEENASLRAELSRIKSEHAKALAENAALKAKQGEIPRNEDIVPGQNDQHVEHVGGGDTKQSG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03376 383 MobiDBLite consensus disorder prediction 213 231 - -
Vivi1g03376 383 MobiDBLite consensus disorder prediction 1 15 - -
Vivi1g03376 383 Gene3D - 287 342 - -
Vivi1g03376 383 Pfam Disordered region downstream of MFMR 137 277 - -
Vivi1g03376 383 SUPERFAMILY Leucine zipper domain 287 340 IPR046347 GO:0003700|GO:0006355
Vivi1g03376 383 MobiDBLite consensus disorder prediction 19 36 - -
Vivi1g03376 383 MobiDBLite consensus disorder prediction 129 143 - -
Vivi1g03376 383 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Vivi1g03376 383 MobiDBLite consensus disorder prediction 148 203 - -
Vivi1g03376 383 Coils Coil 304 352 - -
Vivi1g03376 383 CDD bZIP_plant_GBF1 289 340 IPR045314 GO:0003700|GO:0006355
Vivi1g03376 383 MobiDBLite consensus disorder prediction 349 383 - -
Vivi1g03376 383 Pfam bZIP transcription factor 284 346 IPR004827 GO:0003700|GO:0006355
Vivi1g03376 383 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 291 306 IPR004827 GO:0003700|GO:0006355
Vivi1g03376 383 MobiDBLite consensus disorder prediction 113 231 - -
Vivi1g03376 383 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 286 338 IPR004827 GO:0003700|GO:0006355
Vivi1g03376 383 MobiDBLite consensus disorder prediction 1 36 - -
Vivi1g03376 383 PANTHER G-BOX-BINDING FACTOR 3-RELATED 15 361 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vivi1g03376 383 MobiDBLite consensus disorder prediction 272 311 - -
Vivi1g03376 383 MobiDBLite consensus disorder prediction 279 293 - -
Vivi1g03376 383 SMART brlzneu 284 348 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03376 Vivi-Chr1 72752820 72758534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03376 1 383 bZIP Transcription Factor Family AT2G35530 58.111 9.68e-153 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1g03376 MFMR_assoc 3.8e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03376 K09060 - gmx:778122 564.303