Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03366 ATGGAAATGCAAAGTTTGATGCTCTTTTTGGTATTCTTATGGGCTGAAGTTCATCTTATATCTTCATTTACTGATCCTCAAGATGTTTCTGCACTTAGATCTTTGAAAGATATATGGCAAAATACACCACCAAGCTGGGACAAATCAGATGACCCTTGTGGAGCACCATGGGAAGGAGTGACCTGCAGCAAATCAAGGGTTACTTCATTGAGACTGTCAACCATGGGACTGAAGGGTACATTAAGTGGAGATATTGGTGGACTTCCAGAATTAAGATCCTTGGACTTATCCTTTAATAAAGGTTTAATGGGTTCTATCTCTCCAGAATTGGGAAGCTTAAAAAACCTAAATATTCTGATTTTGGCTGGTTGCAGTTTTAGTGGCAATATTCCAGATGCATTAGGGAATCTTTCAGACCTATCTTTCTTGGCTTTAAATTCAAACAACTTCACTGGAAAAATACCTCAATCATTAGGTAAACTCTCCAAACTATATTGGCTGGACTTGGCAGATAATCAGCTCACAGGACCTCTCCCGGTTTCGACCTCGACATCCCCGGGCTTAGACCAACTTTTACATGCTAAGCACTTCCATTTCAACAAGAATCAGCTTTCTGGTTCCATTTCTCCCAAACTTTTCCACTCTGACATGGTACTCATTCACATATTGTTAGATGGAAATGAATTAATCGGGAGTATACCTTCTACTATAGGACTAGTTCATACAGTTGAGGTTCTTCGGCTCGATAGAAATTTCTTGACAGGAGAAGTCCCTTCGAATCTCAACAAACTTAGTAACATCAATGAACTGAATTTAGCACACAACAAATTGTCCGGTCCTTTGCCGGACTTAACATCAATGGATACCCTGAATTATGTGGATCTTAGTAACAATTCATTTGATCCATCTGAAGCTCCAACTTGGTTCTCAACTCTACCCCAACTCACCACACTTATTGTGGAGTTTGGATCTCTTGAAGGTACTCTTCCATCAGAACTCTTCGGCCTTCCTCAAATACAACAAATAAAACTAAGACACAATGCATTCAACAAAACACTTGAAATGGGAGACAGCATTTGTCCTCAATTGCAGCTTGTGGATTTACAAGACAATCAAATTGCATCCGTAACCATTAGTTCACAGTACAAAAACACATTGATTCTCATAGGAAATCCAGTATGCAGAACTGGTCTCCTCTCTAATACAAACGACTGCAGCCTTCAACAACAGCCGAAACAACCCTATTCAACTAGCTTGGCTAATTGCGGAGGAAGATCATGTCCACCTGATCAAAAACTCAGTCCACAGAGTTGCGAATGTGCATATCCGTATCAAGGAACATTTTATTTTAGGGCACCTTTTTTTAGAGAACTCACTAATATAACTGTTTTCCATTCACTCGAAATGAGTTTATGGGTGAAATTGAGTTTAACACCAGGCTCAGTTTCATTACAAAACCCTTTTTTCAATGGTGATGATTATCTTCAAGTGCAACTCGCACTCTTTCCACCAACAGGACAATATTTTAATAGATCAGAAGTTCAAAGAATTGGATTTTCAATGAGTAATCAAACGTACAAGCCTCCACCTGAATTTGGACCCTATTACTTCATTGCATTTCCTTATTCTTTTCCAGATTCGCGCAGAGGAACTTCTCTTAGCCGAGGTGCTATCATTTTGATAGCGAGTGGAAGTGCAGTTCTGATTTTGTGCCTTATAGGGCTAGCTATATACGCAATCCTGCAAAAGAAGCGCGCAGAGAGAGCTATTGGAATAAGTAGACCGTTCGCATCTTGGGCACCAAGTGGCCAGGATAGTGGAGGTGCACCACAATTGAAGGGAGCAAGATGGTTCTCTTACGATGAACTCAAAAAGTGTACCGATAACTTCTCAGGAAGCAACGAGTTAGGCTTTGGTGGCTATGGCAAGGTGTACAAAGGGGTGTTCCCTGATGGAAAAATAGTTGCAATTAAAAGAGCTCAGCAAGGATCGATGCAAGGAGGACTAGAGTTCAAGAATGAAATCGAATTGCTTTCAAGAGTTCATCACAAGAATCTTGTTAGCCTTGTTGGATTCTGCTTTGAACAAGGAGAACAAATGTTGGTTTATGAATTCATCTACAATGGATCACTTAGAGAGGGTTTGTCAGGGAAATCTGGTATTCAACTTGATTGGAAGAGGAGACTCCGTATTGCTCTCGGCTCAGCTAGAGGACTTGCATACTTACACGAACTTGCCAACCCTCCCATAATCCACAGAGATGTGAAGTCAACCAATATCTTGCTGGATGAAAATTTGACTGCAAAGGTTGCGGATTTTGGCCTGTCTAAGCTTGTATCAGACAGTGACAAAAGCCATGTCTCAACTCAGGTTAAAGGAACATTGGGCTATCTAGATCCTGAATACTACATGACTCAACAACTAACCGAAAAGAGTGACGTATACAGTTTCGGTGTAGTTATGCTTGAACTGATAACATCCAAGCAACCACTTGAAAAGGGTAAGTACATCGTTCGCGAAGTTCAAACCTTAATGAATGAAAGAGATGAAGAGTTCCATGGTTTAAGCGAAGTAATGGATCCATTGGTGAGAAACACAGCCAACCAGATAGGATTTGGCAGGTTCTTAGAGTTGGCAATACAATGCGTCGAGGAATCAGCTTCAGACCGACCAACAATGAGTGACGTTGTGAAAACATTAGAAACCATATTAAAGAATGATGGTTTGAACACAAATTCTACTTCTGCTTCTTCATCTGCTACTGATTTTGGAGTTTCTAAGGGTGCTGCAAAGAGACATCCTTACATTAATAATAGTTTTACTAAGAAGGATAGTGTTGATGAGAGTAATGACTTTGATTACAGTGGAGGGTACACACTTTCAACTAAAGTGGAACCTAAATAG 2904 0.4029 MEMQSLMLFLVFLWAEVHLISSFTDPQDVSALRSLKDIWQNTPPSWDKSDDPCGAPWEGVTCSKSRVTSLRLSTMGLKGTLSGDIGGLPELRSLDLSFNKGLMGSISPELGSLKNLNILILAGCSFSGNIPDALGNLSDLSFLALNSNNFTGKIPQSLGKLSKLYWLDLADNQLTGPLPVSTSTSPGLDQLLHAKHFHFNKNQLSGSISPKLFHSDMVLIHILLDGNELIGSIPSTIGLVHTVEVLRLDRNFLTGEVPSNLNKLSNINELNLAHNKLSGPLPDLTSMDTLNYVDLSNNSFDPSEAPTWFSTLPQLTTLIVEFGSLEGTLPSELFGLPQIQQIKLRHNAFNKTLEMGDSICPQLQLVDLQDNQIASVTISSQYKNTLILIGNPVCRTGLLSNTNDCSLQQQPKQPYSTSLANCGGRSCPPDQKLSPQSCECAYPYQGTFYFRAPFFRELTNITVFHSLEMSLWVKLSLTPGSVSLQNPFFNGDDYLQVQLALFPPTGQYFNRSEVQRIGFSMSNQTYKPPPEFGPYYFIAFPYSFPDSRRGTSLSRGAIILIASGSAVLILCLIGLAIYAILQKKRAERAIGISRPFASWAPSGQDSGGAPQLKGARWFSYDELKKCTDNFSGSNELGFGGYGKVYKGVFPDGKIVAIKRAQQGSMQGGLEFKNEIELLSRVHHKNLVSLVGFCFEQGEQMLVYEFIYNGSLREGLSGKSGIQLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSDKSHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITSKQPLEKGKYIVREVQTLMNERDEEFHGLSEVMDPLVRNTANQIGFGRFLELAIQCVEESASDRPTMSDVVKTLETILKNDGLNTNSTSASSSATDFGVSKGAAKRHPYINNSFTKKDSVDESNDFDYSGGYTLSTKVEPK 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03366 967 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Vivi1g03366 967 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Vivi1g03366 967 FunFam Predicted protein 186 404 - -
Vivi1g03366 967 PANTHER RECEPTOR-LIKE PROTEIN 55 33 903 - -
Vivi1g03366 967 SUPERFAMILY L domain-like 31 395 - -
Vivi1g03366 967 Gene3D Ribonuclease Inhibitor 285 423 IPR032675 -
Vivi1g03366 967 SUPERFAMILY Protein kinase-like (PK-like) 615 912 IPR011009 -
Vivi1g03366 967 ProSiteProfiles Protein kinase domain profile. 630 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03366 967 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 706 917 - -
Vivi1g03366 967 CDD STKc_IRAK 636 903 - -
Vivi1g03366 967 FunFam Leucine-rich repeat protein kinase family protein 598 705 - -
Vivi1g03366 967 Gene3D Phosphorylase Kinase; domain 1 604 705 - -
Vivi1g03366 967 Pfam Protein tyrosine and serine/threonine kinase 634 900 IPR001245 GO:0004672|GO:0006468
Vivi1g03366 967 SMART serkin_6 630 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03366 967 Gene3D Ribonuclease Inhibitor 26 183 IPR032675 -
Vivi1g03366 967 Gene3D Ribonuclease Inhibitor 184 284 IPR032675 -
Vivi1g03366 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Vivi1g03366 967 Gene3D Transferase(Phosphotransferase) domain 1 706 926 - -
Vivi1g03366 967 MobiDBLite consensus disorder prediction 940 967 - -
Vivi1g03366 967 FunFam Leucine-rich repeat family protein 27 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03366 Vivi-Chr1 72677435 72683409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03366 6 967 Receptor kinase-like Gene Family AT1G79620 68.347 0.0 1387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Vivi1g03366 PK_Tyr_Ser-Thr 5.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03366 - - gmx:100792249 1619.75