Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03336 ATGGAGAGGTACAAATTAATTAAGGAGGTTGGGGATGGAACATTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAAGCGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAAAAGTATTATTCTTGGGAGGAGTGTGTAAACCTAAGTGAAGTCAAGTCATTACGAAAAATGAATCACTCAAATGTTGTGAAGCTGAAGGAAGTTATTCGAGAATGTGACATTCTGTACCTTGTTTTTGAGTACATGGAATGCAACCTCTACCAACTAATGAAAAAAAGGGAAAAACTGTTTTCTGAGGATGAAGTTAGAAACTGGTGTTTTCAAGTTTTCCAAGGTCTTGCGTACATGCACCAGCGTGGATATTTTCACCGTGATCTAAAGCCTGAAAACTTGCTTGTCACCAAGAATATTATAAAAGTTTCTGATTTCGGCCTAGTGCGAGAGATCAGCTCACAACCACCCTATACTGAGTATGTCTCCACACGGTGGTATCGTGCCCCTGAAGTCCTGCTTCAGTCTTTCCTTTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATTATGGCTGAGTTGTTCACTCTCCGTCCTCTATTTCCGGGTAGCAGTGAGGCAGATGAGATCTACAAAATATGCAGTGTGGTAGGTAGTCCAACTGCTGAATCTTGGGCCGATGGACTCAAACTTGCTAAGGATATCAACTATCAGTTTCCACAGCTAGCTACTGCAGATCTCTCTGTACTGATTCCATCCAGAAGCGATGATGCAATCAACCTTATCAAATCACTTTGTTCATGGGATCCCTGCAAGAGACCTGCTGCAGCAGAGGCCCTTCAACATCCTTTCTTCAAGAGCTGCTTTTACATCCCTCCATCGCTTCGCACCAGAGCAGTAACCAGAACTCCTCCATCTGCCGGAATAAGGGGAACAGTGGATCGTCAAGGGGTCAGGAGATATTCTGGTGCAATGCCTAATTCGAAACTTGGCAATAATTTTGCTTCCATGAAATTACATCCTTCTGTAGCTCCAGGTGTACAACGGAAGCTGGATATGGCAAAAGAGGATGGAATTAAAGATAAGAAGGCAAAAGAGGATGGAATTAAAGAAAAGAAATCAATGAAGACTACTACTCCACAATCAAAATATCAACCACCAGGAAAAGGCAGCCCTAGTTCTTTAAGCAAGGGGAGAACCGTGCGTTGTGTTTCAGAAACAGCCGACAAGTTTGCCAACATGTCAATTTCTACTCGAAGACATTCCTTGAGTCAAACTCGTCCACCTCCAATGAAAGCTGGAGTTAATTGGAATTCTGAATCTGGAAACATCTTGCTCAGGTCCGCCCAACAGATTCCAACTGGAAGAACTTTAACAAAAAAAGTTGCTGGATGA 1389 0.4269 MERYKLIKEVGDGTFGSVWRAINKQSGEVVAIKKMKKKYYSWEECVNLSEVKSLRKMNHSNVVKLKEVIRECDILYLVFEYMECNLYQLMKKREKLFSEDEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKNIIKVSDFGLVREISSQPPYTEYVSTRWYRAPEVLLQSFLYSSKVDMWAMGAIMAELFTLRPLFPGSSEADEIYKICSVVGSPTAESWADGLKLAKDINYQFPQLATADLSVLIPSRSDDAINLIKSLCSWDPCKRPAAAEALQHPFFKSCFYIPPSLRTRAVTRTPPSAGIRGTVDRQGVRRYSGAMPNSKLGNNFASMKLHPSVAPGVQRKLDMAKEDGIKDKKAKEDGIKEKKSMKTTTPQSKYQPPGKGSPSSLSKGRTVRCVSETADKFANMSISTRRHSLSQTRPPPMKAGVNWNSESGNILLRSAQQIPTGRTLTKKVAG 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03336 462 MobiDBLite consensus disorder prediction 415 436 - -
Vivi1g03336 462 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Vivi1g03336 462 Gene3D Transferase(Phosphotransferase) domain 1 84 289 - -
Vivi1g03336 462 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Vivi1g03336 462 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03336 462 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Vivi1g03336 462 MobiDBLite consensus disorder prediction 348 375 - -
Vivi1g03336 462 FunFam serine/threonine-protein kinase MAK isoform X1 1 83 - -
Vivi1g03336 462 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 348 - -
Vivi1g03336 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Vivi1g03336 462 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Vivi1g03336 462 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03336 462 CDD STKc_MAK_like 4 283 - -
Vivi1g03336 462 MobiDBLite consensus disorder prediction 344 400 - -
Vivi1g03336 462 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g03336 462 MobiDBLite consensus disorder prediction 376 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03336 Vivi-Chr1 72295746 72302434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03336 1 290 Core Cell Cycle Gene Families AT3G48750 37.584 2.43e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Vivi1g03336 Pkinase 4.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03336 K08829 - gmx:100784474 778.474