LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi1g03321	ATGAGGCCACGCAGAGACACTAATAACAGATTCAATATCAATTTCAATTTCCACCATTCAGCAACAAAACCAACCACCGCGTCCCCACGGCGGCGAGCTCCTCCGTTTACGAAACGATTACTCCTCTTCATGGCGGGACAATCCAGAAAATGGATGATCCTTGTCGTCACGATTTGGATTCAGGCTTTCACCGGAACGAATTTTGATTTCTCGCAATACTCGTCGTCGTTGAAAGCCGCACTCGGAATTTCTCAGGCGCAGCTTAATTATTTGGCCACCGCGAATGATATGGGGAAGGTTTTCGGTTGGTCTTCTGGTTTGGCGCTTATTTATCTTCCTGTTTCGGTTGTTATGTTTATTACGGCATTCATGGGTTTTTTTGGGTATGGTCTTCAATGGCTTCTCATCAACCATTTCATCGATTTGCCTTATTTTCTGGTGTTTCTTCTGTGTCTTTTAAGTGGTTGTAGCATCTGCTGGTTCAATACTGTATGTTTTGTTCTCTGCATTAGGAATTTTCCGGTTCACCGAACACTTGCATTATCACTTACTGTGAGTTTCAATGGTGTCAGCGCAGCCCTTTATACTCTTGCTGCCAATTCCATAGACCCATCATCTGACGAACTGTATCTTCTTTTGAATGCCCTTGTTCCCCTTCTTGTTTGCATTGCAGCAATTGTTCCAATTCTTCGCCAACCGCCTGTAGATCCTCTTCCACCAGACGCATTTAACCGCGACTCGCTAGTATTTCTAATCTTGAACTTCCTAGCCATTTTCACTGGCCTTTATCTCCTCTTGTTTGCCTCAACTGCTTCTTCCATGACTTCAGCTCGGCTACACTTTGGTGTAACTATTCTTCTCCTCACCCTCCCGATGTTTATTCCTGGCATTGTATATGCCCGGGCTTGGGCTCGACGTACCATCCATTCCAGCTTTAAGATAGAAGGATCCAGCTTCCTTCTTGTTCATGATGATGCTCTTGAGCTGCATAAAGAACTACTTAGCCGTCACAATAGTCTTACGGGCAATGGAGATTCTTACAGCCTGCTAAGCAACAATGGATCAATGTATTCAAGTCAGAAGACAAGTGATAGTGATATGTGTTGTGAGAGGATGATTGGTCAGGATCACTTGACAATGCTAGGAGAAGAACACTCGGCTGCGGTGCTTCTCCGAAGGTCAGACTTTTGGCTATACTACATTACATACTTCTGTGGAGGTACAATTGGTCTCGTCTATAGCAATAATCTGGGACAGATTTCTCAATCTCTGGGCCTGAAATCAAGTACTTCTACCCTTGTTACTCTCTATGCATCCTTTTCGTTTTTCGGCCGCTTGCTTTCAGCCGGACCAGACTATATTCGTAGTAAGTTCTACTTTGCAAGAACTGGCTGGCTCTCAATTGCACTTATACCAACACCGATTGCGTTCTTCTTGCTCGCTGCATCAGACAGTTCTCTGGCTCTGCATACAGGAACTGCACTAATAGGAATGAGTTCTGGTTTCATATTTGCAGCTGCGGTTTCAGTTACATCCGAGCTTTTTGGACCCAACAGCGTTGGTGTCAATCACAACATTGTCATAACAAATATCCCCATTGGTTCGCTTCTCTACGGTTTCCTCGCTGCACTAGTTTATGATGCCCATGCTCAGGCACACTCAACGCCGGGAAACTTGACAACGTCTGAGTCAGTAGTTTGCATGGGAAGGCAATGCTACTTCTGGACTTTTGTCTGGTGGGGATGCATATCTGTCCTGGGACTATGTTCTAGTATGCTGTTATTCCTAAGAACCAGACATGCATATGAACATTTTGAGGAACACCGGACTTCAACACATGCTATTGTGTCTTAA	1854	0.4466	MRPRRDTNNRFNINFNFHHSATKPTTASPRRRAPPFTKRLLLFMAGQSRKWMILVVTIWIQAFTGTNFDFSQYSSSLKAALGISQAQLNYLATANDMGKVFGWSSGLALIYLPVSVVMFITAFMGFFGYGLQWLLINHFIDLPYFLVFLLCLLSGCSICWFNTVCFVLCIRNFPVHRTLALSLTVSFNGVSAALYTLAANSIDPSSDELYLLLNALVPLLVCIAAIVPILRQPPVDPLPPDAFNRDSLVFLILNFLAIFTGLYLLLFASTASSMTSARLHFGVTILLLTLPMFIPGIVYARAWARRTIHSSFKIEGSSFLLVHDDALELHKELLSRHNSLTGNGDSYSLLSNNGSMYSSQKTSDSDMCCERMIGQDHLTMLGEEHSAAVLLRRSDFWLYYITYFCGGTIGLVYSNNLGQISQSLGLKSSTSTLVTLYASFSFFGRLLSAGPDYIRSKFYFARTGWLSIALIPTPIAFFLLAASDSSLALHTGTALIGMSSGFIFAAAVSVTSELFGPNSVGVNHNIVITNIPIGSLLYGFLAALVYDAHAQAHSTPGNLTTSESVVCMGRQCYFWTFVWWGCISVLGLCSSMLLFLRTRHAYEHFEEHRTSTHAIVS	617

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi1g03321	617	SUPERFAMILY	MFS general substrate transporter	35	233	IPR036259	-
	Vivi1g03321	617	Pfam	Nodulin-like	50	295	IPR010658	-
	Vivi1g03321	617	SUPERFAMILY	MFS general substrate transporter	382	600	IPR036259	-
	Vivi1g03321	617	Gene3D	MFS general substrate transporter like domains	8	229	IPR036259	-
	Vivi1g03321	617	Gene3D	MFS general substrate transporter like domains	391	609	IPR036259	-
	Vivi1g03321	617	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	51	603	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi1g03321	Vivi-Chr1	72114350	72120111	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi1g03321	1	611	Nodulin-like Gene Family	AT1G31470	54.619	0.0	593

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi1g03321	-		-	cam:101496594	1025