Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03315 ATGTGGATGATGATAAAGGACTTGGTCCTACTGTTCCTTCTCAGAACGAAAGCGAAGGAAGATAGCTCGGAGAAGGAGAAGTCTCTCGATCTCTTTCTGAAGATCGGCTTAGACGAACGCACAGCTCGAAACACCATCGCCAACAACAAAGTCACTACCAATCTCACTGCTGTTATCCACGAGGCCGGTGTTACCGACGGATGCAGCCGATCAGTTGGGAACCTTATTTATACGGTGAGTTACAATGAATCAAAAGTGGTTGTGATTGGATTTTGGAGTGGATTTGCTTGGTTGGCTGGAATGACTGTGTTCATTGCTATATTGTCTGAATATGTGGTGGATACAATTGAGGATGCATCAGATTCATGGGGTTTATCTGTGAGCTTCCTCAGCATAATCTTGCTACCTATAGTTGATTTCAGTTCATTTGATGCAATGGGAGTGTTTGAGAGCTTTACCCTTTCATATTGGTGTTATAGTAATCAACATTGTTTGGAGTTAGCCAAAAAGCATATGAGCAATAGAAGGGACTATGTAACTGCATCCGTCAATGTACTTCGGTCTCATCGGTGA 573 0.4293 MWMMIKDLVLLFLLRTKAKEDSSEKEKSLDLFLKIGLDERTARNTIANNKVTTNLTAVIHEAGVTDGCSRSVGNLIYTVSYNESKVVVIGFWSGFAWLAGMTVFIAILSEYVVDTIEDASDSWGLSVSFLSIILLPIVDFSSFDAMGVFESFTLSYWCYSNQHCLELAKKHMSNRRDYVTASVNVLRSHR 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03315 190 Gene3D - 22 87 IPR042558 -
Vivi1g03315 190 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 10 138 IPR004713 GO:0006812|GO:0008324|GO:0016020
Vivi1g03315 190 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 27 81 IPR007639 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03315 Vivi-Chr1 72049665 72054742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03315 79 152 Antiporters AT3G51860 68.919 2.26e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03315 K01886 - vvo:131641584 372.859