Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03313 ATGGAGAGTTCAAGAATCATGCAATGGTTAGACATTCTACTATGTGCACTGCTATTGTTACTAAAGACACATGGACAATTTGTTCCACTGACTCGGCTCGAGAGTGCGGTATCAAAAGGAGCAGTGTGTTTGGATGGAAGTCCCCCGGCTTACCATTTTCATGAAGGACATGAAGAAGGAGTTAACAACTGGATTGTTCACATTGAGGGAGGTGGATGGTGCCACAATGTCACATATTGTCTATACCGAAAGGACAGTCGGTTAGGTTCGTCGCATGAAATGGAAGAGCAGACTTATTTTTCTGGATATTTAAGTAACAACCAACAATATAATCCTGATTTCTACAACTGGAATAGAGTTAAAGTAAGGTACTGTGATGGATCATCATTTACTGGTGATGTTGAAGAAGTTGATCCAGAGACAAATTTGTACTTCAGAGGATCAAGGATTTTTTCTGCTGTAATGGAAGATTTAATAGCAAAAGGAATGGCTCATGCTGATAAAGCTATTCTTTCTGGATGTTCTGCTGGAGGATTAACTGCTATATTACACTGTGATCGATTTAGATCAATGTTACCTGATGGAACTAAAGTGAAATGTGTCTCAGATGCTGGCTATTTTGTTAATGTAAAAGATATCTCGGGAGATTATTACATTGAAGATTACTTCGGTCAAGTTGTTGAAACACATGGTTCGGAAAAGACTTTGCCTCAATCTTGCACTTCAAGACTCACTCCAGGACTAGTAATGTTTTTTCCCAGAATATGTGGCACCAAATATCAGCACTCCAATCTTTATTGTAAATGCAGCATATGA 816 0.3873 MESSRIMQWLDILLCALLLLLKTHGQFVPLTRLESAVSKGAVCLDGSPPAYHFHEGHEEGVNNWIVHIEGGGWCHNVTYCLYRKDSRLGSSHEMEEQTYFSGYLSNNQQYNPDFYNWNRVKVRYCDGSSFTGDVEEVDPETNLYFRGSRIFSAVMEDLIAKGMAHADKAILSGCSAGGLTAILHCDRFRSMLPDGTKVKCVSDAGYFVNVKDISGDYYIEDYFGQVVETHGSEKTLPQSCTSRLTPGLVMFFPRICGTKYQHSNLYCKCSI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03313 271 Pfam Pectinacetylesterase 22 254 IPR004963 GO:0016787
Vivi1g03313 271 PANTHER NOTUM-RELATED 16 254 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03313 Vivi-Chr1 72013634 72015310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03313 5 254 Carbohydrate Esterase AT4G19420 61.200 1.12e-116 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03313 K19882 - gmx:100780707 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03313 1 72013634 72015310 Vivi2g02605 2 117519580 117525028 PCT