Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03312 ATGGAGAGTTCAAGAATCATGCAATGGTTAGACATTCTACTATGTGCACTGCTATTGTTACTAAAGACACATGGACAATTTGTTCCACTGACTCGGCTCGAGAGTGCGGTATCAAAAGGAGCAGTGTGTTTGGATGGAAGTCCCCCGGCTTACCATTTTCATGAAGGACATGAAGAAGGAGTTAACAACTGGATTGTTCACATTGAGGGAGGTGGATGGTGCCACAATGTCACATATTGTCTATACCGAAAGGACAGTCGGTTAGGTTCGTCGCATGAAATGGAAGAGCAGACTTATTTTTCTGGATATTTAAGTAACAACCAACAATATAATCCTGATTTCTACAACTGGAATAGAGTTAAAGTAAGGTACTGTGATGGATCATCATTTACTGGTGATGTTGAAGAAGTTGATCCAGAGACAAATTTGTACTTCAGAGGATCAAGGATTTTTTCTGCTGTAATGGAAGATTTAATAGCAAAAGGAATGGCTCATGCTGATAAAGCTATTCTTTCTGGATGTTCTGCTGGAGGATTAACTGCTATATTACACTGTGATCGATTTAGATCAATGTTACCTGATGGAACTAAAGTGAAATGTGTCTCAGATGCTGGCTATTTTGTTAATGTAAAAGATATCTCGGGAGATTATTACATTGAAGATTACTTCGGTCAAGTTGTTGAAACACATGGTTCGGAAAAGACTTTGCCTCAATCTTGCACTTCAAGACTCACTCCAGGACTATGTTTTTTCCCAGAATATGTGGCACCAAATATCAGCACTCCAATCTTTATTGTAAATGCAGCATATGACTCATGGCAGATTAAGAACATTTTGGCGCCCGGTGCTGCTGATCCGAATGGTCAATGGGGTAGCTGCAAGACTAATCTAAACAACTGCTCACCAGAACAACTAAATATAATGCAAGACTATAGGTCACAATTCTTAAAGGCGTTGAGTCCTATAACCATCTCTCCATCTAATGGAGTGTTCATAGACTCTTGCTATGTCCATTGCCAAACAGAACCACAGGAAACATGGTTTACAAATGACTCTCCAATGGTTGACAATAAAACAGTTGCAATGGCAGTAGGAGACTGGTTTTATGAAAGAAGTCCTTCACGTGAGATAGACTGCACTTACCCTTGCAACCCTACTTGTCAAAACCATGTTTTTAATGCACAAGCATACCCAGGAATACACTAG 1206 0.398 MESSRIMQWLDILLCALLLLLKTHGQFVPLTRLESAVSKGAVCLDGSPPAYHFHEGHEEGVNNWIVHIEGGGWCHNVTYCLYRKDSRLGSSHEMEEQTYFSGYLSNNQQYNPDFYNWNRVKVRYCDGSSFTGDVEEVDPETNLYFRGSRIFSAVMEDLIAKGMAHADKAILSGCSAGGLTAILHCDRFRSMLPDGTKVKCVSDAGYFVNVKDISGDYYIEDYFGQVVETHGSEKTLPQSCTSRLTPGLCFFPEYVAPNISTPIFIVNAAYDSWQIKNILAPGAADPNGQWGSCKTNLNNCSPEQLNIMQDYRSQFLKALSPITISPSNGVFIDSCYVHCQTEPQETWFTNDSPMVDNKTVAMAVGDWFYERSPSREIDCTYPCNPTCQNHVFNAQAYPGIH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03312 401 PANTHER NOTUM-RELATED 16 389 IPR004963 GO:0016787
Vivi1g03312 401 SUPERFAMILY alpha/beta-Hydrolases 144 273 IPR029058 -
Vivi1g03312 401 Pfam Pectinacetylesterase 22 372 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03312 Vivi-Chr1 72012007 72015305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03312 5 400 Carbohydrate Esterase AT4G19420 55.452 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03312 K19882 - gmx:100780707 592.423