Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03304 ATGGATGTTTCAACTTTCATTTTCTACTTTCTTTCTCTTCTCTTCATTCTTGTTGTTCTATTCAAATCATTCTTCAAGTCCTTCTTTTTTTCTTCTAATGGAAAGCAATTGCCTCTCCCTCCTGGCTCTATGGGGTATCCTTACATAGGTGAAACCTTCCAAATGTATTCTCAAGACCCTAACCTTTTCTTTGCCAACAAAATCAAAAGGTATGGTGCTATGTTCAAGTCACATATTCTAGGTTGTCCTTGTGTAATGATTTCAAGTCCAGAAGCAGCAAAGTTTGTCCTAAACAAAGCACAACTTTTCAAACCAACATTTCCAGCTAGCAAAGAAAGGATGTTAGGGAAACAAGCAATTTTCTTTCATCAAGGAAATTACCATACTAACCTTAGAAGACTTGTTCTTCGCACCTTCATGCCTGAAGCCATCAAAAGCATTGTTCCCAACATTGAATCCATTGCTCAATCTTGTCTCAAATCATGGGAGGGAAATCTAATCACCACTTACCTTGAAATGAAAACATTCACCTTCAACGTTGCACTTCTATCAATTTTTGGAAAAGATGAAATTCTATACAGAGAAGATCTAAAAAGATGCTACTACACACTTGAGAAAGGGTACAATTCAATGCCAATAAACCTTCCAGGAACACTATTTCACAAAGCAATGAAAGCAAGAAAAGAGCTAGCTCAGATCTTGGAACAAATAATCTCAACAAGGAGGTGCAAAAAGCAAGAATACAATGATTTGTTAGGCTCTTTCATGGATGAGAAAGCAGGACTGAGTGATGAACAAATATCAGATAACATCATTGGTGTGATTTTTGCAGCTCGTGACACAACTGCTAGTGTACTTACATGGGTTGTTAAGTACCTTGGTGAAAATCCTAGTGTCCTTGAATCTGTCACTGAAGAGCAAATGTCTATAATAAAAGGGAAACAAGAAAGTGGTGAAGAAATTGGTCTAAATTGGGAGGACACAAAAAACATGCCTGTAACTTCAAGGGTCATACAAGAGACACTAAGAGTAGCATCAATTTTGTCTTTTACATTTAGAGAAGCAACCGAAGATGTTGAATATCAAGGGTATCTTATACCAAAAGGATGGAAAGTATTACCACTTTTTAGAAACATACATCACAGTCCAGAAAATTTCAAAGAGCCTGCAAAATTTGATCCTTCAAGATTTGAGGTTGCTCCAAAACCTAACACTTTCATGCCATTTGGAAATGGGGTCCATGCATGTCCTGGCAATGAATTAGCAAAGTTAGAGATTTTGGTTCTTGTACATCATCTAACCACAAAATACAGGTGGTCTGTGGTTGGTGAAAAAAATGGAATTCAGTATGGACCTTTTGCTCTTCCACAAAATGGCTTACCAATCAAATTATATTCAAAGAAATAA 1407 0.3667 MDVSTFIFYFLSLLFILVVLFKSFFKSFFFSSNGKQLPLPPGSMGYPYIGETFQMYSQDPNLFFANKIKRYGAMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGNYHTNLRRLVLRTFMPEAIKSIVPNIESIAQSCLKSWEGNLITTYLEMKTFTFNVALLSIFGKDEILYREDLKRCYYTLEKGYNSMPINLPGTLFHKAMKARKELAQILEQIISTRRCKKQEYNDLLGSFMDEKAGLSDEQISDNIIGVIFAARDTTASVLTWVVKYLGENPSVLESVTEEQMSIIKGKQESGEEIGLNWEDTKNMPVTSRVIQETLRVASILSFTFREATEDVEYQGYLIPKGWKVLPLFRNIHHSPENFKEPAKFDPSRFEVAPKPNTFMPFGNGVHACPGNELAKLEILVLVHHLTTKYRWSVVGEKNGIQYGPFALPQNGLPIKLYSKK 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03304 468 Pfam Cytochrome P450 40 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 PANTHER CYTOCHROME P450 26 35 444 - -
Vivi1g03304 468 SUPERFAMILY Cytochrome P450 35 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 CDD CYP90-like 68 464 - -
Vivi1g03304 468 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 PRINTS E-class P450 group I signature 286 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 Gene3D Cytochrome P450 30 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 FunFam Abscisic acid 8 30 466 - -
Vivi1g03304 468 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03304 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03304 Vivi-Chr1 71834946 71838275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03304 1 462 Cytochrome P450 AT4G19230 70.538 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03304 K09843 - gmx:100170674 787.719