Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03298 ATGGGAGGTGCAGGGAGTGGTGAGATATGGAAAGCACATACCGCCATGGCGATTGTGCAGTTGTTCACCGGAGGCTATCATGTTATCACCAAATTGGCTCTTAATGTTGGAGTCAACCAGATTGTTTTTTGTGTTTTTCGTGATCTCCTTGCTCTCTCTATTCTCGCGCCTATTGCTTATTTCCGTGAAAGACGTACACGGCCACCCCTAACAAAGCGCTTTGTGACATCATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAATCATCTTTTGTTTCTTATTGGTTTAAGCTATACTACTCCAACTTATGCTGCTGCAATTCAGCCAGCTACTCCAGTCTTTACATTTGTGTTGGCTATAATGATGGGTACAGAAAGAGTAAACTTGCTAAGGTATGAAGGTCTGGCCAAGGTTGGAGGAATTTTTATCTGCGTTTTGGGGGCCTTAGTGATGGTTCTGTACCGTGGTCCAGCACTGGTAGGATCTTCAGAACTGGACCTTATATCACATAGTGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAGTTAGTGGTTTAATGGATCTTGGATTTGACCATTTTCATCTTGGAGTTATGTGCTTCATAGGGAACTGCATGTGCATGGCTACTTTTCTATCCATTCAGGCTCCATTATTAAAAAAGTATCCTGCAAACCTATCTGTCACAGCATATTCATACTTCTTTGGAGCTTTACTGATGGTAACTACATCATACTTCGTAACCGATGAGTCAACTGACTGGAGTTTGAATCAGTCTGAAACATTTGCCGTTTTATATGCTCCATTCTAA 822 0.4173 MGGAGSGEIWKAHTAMAIVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAYFRERRTRPPLTKRFVTSFFFLGLTGIFGNHLLFLIGLSYTTPTYAAAIQPATPVFTFVLAIMMGTERVNLLRYEGLAKVGGIFICVLGALVMVLYRGPALVGSSELDLISHSEISAKGQPEPSGWLVSGLMDLGFDHFHLGVMCFIGNCMCMATFLSIQAPLLKKYPANLSVTAYSYFFGALLMVTTSYFVTDESTDWSLNQSETFAVLYAPF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03298 273 Pfam EamA-like transporter family 15 153 IPR000620 GO:0016020
Vivi1g03298 273 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Vivi1g03298 273 PANTHER WAT1-RELATED PROTEIN 14 271 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03298 Vivi-Chr1 71667566 71671950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03298 8 271 Nodulin-like Gene Family AT3G45870 67.424 7.13e-124 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03298 - - gmx:100809051 480.33