Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03297 ATGGGAGGTGCAGGGAGTGGTGAGATATGGAAAGCACATACCGCCATGGCGATTGTGCAGTTGTTCACCGGAGGCTATCATGTTATCACCAAATTGGCTCTTAATGTTGGAGTCAACCAGATTGTTTTTTGTGTTTTTCGTGATCTCCTTGCTCTCTCTATTCTCGCGCCTATTGCTTATTTCCGTGAAAGACGTACACGGCCACCCCTAACAAAGCGCTTTGTGACATCATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAATCATCTTTTGTTTCTTATTGGTTTAAGCTATACTACTCCAACTTATGCTGCTGCAATTCAGCCAGCTACTCCAGTCTTTACATTTGTGTTGGCTATAATGATGGGTACAGAAAGAGTAAACTTGCTAAGGTATGAAGGTCTGGCCAAGGTTGGAGGAATTTTTATCTGCGTTTTGGGGGCCTTAGTGATGGTTCTGTACCGTGGTCCAGCACTGGTAGGATCTTCAGAACTGGACCTTATATCACATAGTGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAGTTAGTGGTTTAATGGATCTTGGATTTGACCATTTTCATCTTGGAGTTATGTGCTTCATAGGGAACTGCATGTGCATGGCTACTTTTCTATCCATTCAGGCTCCATTATTAAAAAAGTATCCTGCAAACCTATCTGTCACAGCATATTCATACTTCTTTGGAGCTTTACTGATGGTAACTACATCATACTTCGTAACCGATGAGTCAACTGACTGGAGTTTGAATCAGTCTGAAACATTTGCCGTTTTATATGCTGGAATTATTGCATCTGCACTTAATTATGGAATCATTACATGGAGCAACAAAATCTTGGGCCCAGCCATGGTTGCCCTTTATAATCCACTTCAACCTGGGGCAGCTGCTCTCTTATCTAGAATTTTTATTGGAAGTCCAATTTACATGGGAAGCGTGTTAGGTGGATCGCTAATCATTACTGGTCTGTATGCGGTTACTTGGGCATCATATAGAGAAAGACAGGCAGCTGCTGGAGTTATTCCTCATCATGCTTCTAATTGGGTTTCTGAATCACTTAACAAGACCAAGACTCCGTTTCATAGAGTTAACATTTTCTCAGGCGCCTCTGGTTTATTATCCCCAAAGCCTTCGGATTGA 1170 0.4197 MGGAGSGEIWKAHTAMAIVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAYFRERRTRPPLTKRFVTSFFFLGLTGIFGNHLLFLIGLSYTTPTYAAAIQPATPVFTFVLAIMMGTERVNLLRYEGLAKVGGIFICVLGALVMVLYRGPALVGSSELDLISHSEISAKGQPEPSGWLVSGLMDLGFDHFHLGVMCFIGNCMCMATFLSIQAPLLKKYPANLSVTAYSYFFGALLMVTTSYFVTDESTDWSLNQSETFAVLYAGIIASALNYGIITWSNKILGPAMVALYNPLQPGAAALLSRIFIGSPIYMGSVLGGSLIITGLYAVTWASYRERQAAAGVIPHHASNWVSESLNKTKTPFHRVNIFSGASGLLSPKPSD 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03297 389 Pfam EamA-like transporter family 200 337 IPR000620 GO:0016020
Vivi1g03297 389 Pfam EamA-like transporter family 15 153 IPR000620 GO:0016020
Vivi1g03297 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 259 342 - -
Vivi1g03297 389 PANTHER WAT1-RELATED PROTEIN 14 344 IPR030184 GO:0016020|GO:0022857
Vivi1g03297 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03297 Vivi-Chr1 71666620 71671944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03297 8 271 Nodulin-like Gene Family AT3G45870 67.424 5.43e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03297 - - gmx:100809051 647.121