Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03289 ATGTCTTCTTCTTTTCGTTATCCTGTTATGAACAGTACCTTGTTTTCTCTGTTTCTTTTTGTGCTTATTGCAAATGTTAGCTTTTGCTTCTCCACCAAGGTTTATTTAGTTTATATGGGAAGCAAAAGTGGTGAACATGAACACCCAGATGATATTTTGAAGGAAAATCATCAAATACTTGCTTCTGTTCATAATGGAAGCATTGAACAAGCACAAGCTTCTCATGTTTATAGCTATAGACATGGTTTTAGAGGCTTTGCAGCTAAGCTCAGTGATGAACAAGCTTCACAAATTTCTAAAATGGCAGGAGTGGTTTCTGTTTTTCCAAATTCTAAAAGAAAGCTTCACACAACTCATTCATGGGATTTCATGGGACTTTTGGATGACCAAACCATGGAAACTCTTGGCTACTCTATTAAAAACCAAGAAAACATCATCATTGGTTTCATTGATACTGGAATTTGGCCAGAATCTCCGAGTTTCAGTGACACCGACATGCCAGCAGTGCCACCAGGGTGGAAAGGTCAATGTCAATCAGGAGAAGCATTCAATGCTTCAACTTGCAACAGGAAAGTGATAGGTGCGAGATACTATATAAGTGGATACGAAGCAGAAGAAGAGTCAAACGAAAAAGTCTCGTTCAAATCAGCTAGGGATAGCACTGGTCACGGTAGCCATACAGCTTCTATAGCCACGGGGAGATACGTAGAAAACATGAACTATAAAGGACTAGCAAGTGGAGGTGCGAGAGGAGGGGCACCAATGGCTAGGATTGCTGTATACAAAACATGCTGGGATTCAGGTTGCTATGATGTGGACTTGTTAGCTGCATTTGATGATGCTATAAGAGATGGAGTTCACATTTTGTCTCTATCACTCGGTGCTCAATCACCGCAAGGAGATTATTTCAATGATGCTATATCTATAGGTTCGTTTCACGCTGCTAACCGTGGAGTGCTTGTTGTTTCATCGGCTGGAAATGAAGGAATGCCGGGTTCTGCTACTAATCTTGCACCATGGATGCTTACTGTTGCTGCTAGCTCAACTGATAGGGATTTCACTTCTGATATCATGTTAGGAAATGGCGCAAAAGTCACGGGTGAAAGTCTGAGTCTGTTTGAAATGAATGCATCATCAAGGATAATTTCGGCATCTCAAGCCTTTGCAGGATACTTCACTCCTTATCAATCCAGTTACTGTTTAGAGAGTTCTTTGAATAAAACAAAGACCAAAGGGAAGGTTCTAGTTTGTAGACATGTCGAGAGTTCAACTGATTCAAAGGTGAAAAAGAGTAAGATAGTTAAAGAAGCAGGTGGAGTTGGAATGATACTTATTGATGAGACAAATCAAGATGTTGCTATCCCGTTCGTGATCCCTTCGGCTATTGTTGGAAAGAAAACAGGCGAAAAGATTCTATCCTATCTCAAGACTACTCGTAAACCTATGTCAAAGATATTAAGAGCAAAGACAGTAATTGGAGCTCAACCAGCACCGCGCGTCGCAGCATTTTCTTCTAGAGGTCCTAGTGCTCTAAGCCCTGAAATTTTGAAGCCTGATATCACAGCTCCAGGAATAAACATTCTTGCAGCATGGTCTCCAGCAACCGGAAACATGTTCAACATTCTCTCGGGAACTTCTATGGCTTGCCCTCATGTAACCGGAATCGCAACCTTAGTCAAAGCTGTTCATCCTTCATGGTCTCCGTCTGCCATCAAATCCGCCATCATGACAACCGCAACAATCCTAGATAAACATCACAAACCGATCAGCGTAGATCCAGAACAAACAAGGGCCAATGCGTTCGATTATGGATCAGGGTTTTTGAACCCTGCAAGAGTTCTTGACCCTGGTCTCATCTACGATTCCGAACCAACAGATTTTATCGCATTCCTATGTTCACTTGGTTATGATCAAAGATCACTTCATCTAGTTACTAGAGACAACAGCACATGTAATAGCATGAACACATTGACCACTGCATCAAACCTCAACTATCCATCCATTTCAGTTCCAAATCTCAAAGACAGTTTTTCAGTTACAAGGGTTGTGACAAATGTTGGAAAAGCAACAAGTATATATAAATCTATAGTTTCTTCACCACCTGGTGTTAATGTCACGGTTACGCCGAACCGGTTAGTTTTCAGAAGAATGGGACAGAAAATCAAGTTCATTGTGAATTTCAAAGTAACTTCTCCTTCAAAAGGATACAAATTTGGATTCTTGTCATGGAAAAATAAAAGATTACAAGTTACTAGTCCTTTGGTTGTAAAGGTTGGTTAG 2280 0.4075 MSSSFRYPVMNSTLFSLFLFVLIANVSFCFSTKVYLVYMGSKSGEHEHPDDILKENHQILASVHNGSIEQAQASHVYSYRHGFRGFAAKLSDEQASQISKMAGVVSVFPNSKRKLHTTHSWDFMGLLDDQTMETLGYSIKNQENIIIGFIDTGIWPESPSFSDTDMPAVPPGWKGQCQSGEAFNASTCNRKVIGARYYISGYEAEEESNEKVSFKSARDSTGHGSHTASIATGRYVENMNYKGLASGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAQSPQGDYFNDAISIGSFHAANRGVLVVSSAGNEGMPGSATNLAPWMLTVAASSTDRDFTSDIMLGNGAKVTGESLSLFEMNASSRIISASQAFAGYFTPYQSSYCLESSLNKTKTKGKVLVCRHVESSTDSKVKKSKIVKEAGGVGMILIDETNQDVAIPFVIPSAIVGKKTGEKILSYLKTTRKPMSKILRAKTVIGAQPAPRVAAFSSRGPSALSPEILKPDITAPGINILAAWSPATGNMFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKHHKPISVDPEQTRANAFDYGSGFLNPARVLDPGLIYDSEPTDFIAFLCSLGYDQRSLHLVTRDNSTCNSMNTLTTASNLNYPSISVPNLKDSFSVTRVVTNVGKATSIYKSIVSSPPGVNVTVTPNRLVFRRMGQKIKFIVNFKVTSPSKGYKFGFLSWKNKRLQVTSPLVVKVG 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03289 759 Pfam Subtilase family 143 582 IPR000209 GO:0006508|GO:0008236
Vivi1g03289 759 Pfam PA domain 388 471 IPR003137 -
Vivi1g03289 759 Gene3D - 631 758 - -
Vivi1g03289 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 756 IPR045051 -
Vivi1g03289 759 FunFam Subtilisin-like protease SBT1.5 631 759 - -
Vivi1g03289 759 Pfam Fibronectin type-III domain 662 756 IPR041469 -
Vivi1g03289 759 FunFam Subtilisin-like protease SBT5.3 24 116 - -
Vivi1g03289 759 FunFam subtilisin-like protease SBT1.5 350 492 - -
Vivi1g03289 759 CDD Peptidases_S8_3 114 580 IPR034197 -
Vivi1g03289 759 Gene3D Peptidase S8/S53 domain 144 627 IPR036852 GO:0004252|GO:0006508
Vivi1g03289 759 FunFam Subtilisin-like protease SBT1.5 144 361 - -
Vivi1g03289 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 116 IPR037045 -
Vivi1g03289 759 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Vivi1g03289 759 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Vivi1g03289 759 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Vivi1g03289 759 Pfam Peptidase inhibitor I9 34 116 IPR010259 -
Vivi1g03289 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Vivi1g03289 759 Gene3D - 350 492 - -
Vivi1g03289 759 ProSiteProfiles Serine proteases, subtilase domain profile. 120 614 - -
Vivi1g03289 759 SUPERFAMILY Subtilisin-like 115 618 IPR036852 GO:0004252|GO:0006508
Vivi1g03289 759 CDD PA_subtilisin_like 359 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03289 Vivi-Chr1 71575927 71580539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03289 33 758 Subtilisin-like Serine Gene Family AT5G45650 41.613 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03289 - - gmx:100819201 1303.12