Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03282 ATGGACCTTTACACTGATCCAGAACCACCACCACCACCAGATTCCGCCACCGTCACCGTCAACGGCGCAACCACATTGGATGAAAACCCAGAACCCCCACCTGCATCAACATCACCACCACCACCATCATTATCATCACCACCACCAGAACTTCAACTCCCAATATCTTGGCCAGAAGACGGAAACCTAACCATAGAATGGATCCAAAACCTAATACTCTGCTTCGATTGGTCCTCCAAAAACCTACCACCTTCCCAATTCCCTTCCGTTCTCCCCGTTCAAGTCTTCGATTCTCTCATCCTCATCGCCTCCAAGATGCTTCACAAGGAACCCAATTGCATCCCTATACAACCCTTTCGTCCCGAACCCGAATCTTCTGCATCGGTTGTGGTTGTTGGAGATGTTCATGGTCAATTGCACGATGTTCTTTTCCTCTTCCGAGAAGCTGGGTACCCTTCTCGGGATCGAATCTTTGTATTCAATGGTGATTATGTTGATCGTGGAGCTTGGGGACTCGAAACTTTCTTGCTCTTGTTGGCTTGGAAGGTATTCATGCCGGAGAACATATATTTATTAAGAGGGAATCACGAATCAAAATATTGCACATCTGTTTATGGTTTTGAGAAAGAAGTTATGGTAAAGTATAGTGACAGTGGTAAACATGTATACAGAAAATGTTTAGGATGTTTTGAAGGCCTTCCTTTGGCTTCTATTATAGCAGGGTGTGTATACACGGCTCATGGAGGACTTTTCCGTAGTGTAACTGTGACGCCTGCTAAGCGATTAAAAGGAAAGAAGAATCGTAGGATTAATGTTAATACCGACAGCAAAAGGCTATCGCTTGGTTCTTTGGAAGAGTTGTCAAGGGCTCGACGTTCTGTCCTTGATCCCCCTTGGGAAGGACAAAACTTGATTCCTGGTGATGTTTTGTGGTCTGACCCTTCACAAACCAACGGTCTTTCTCCAAACAAAGAAAGGGGCATTGGATTGATGTGGGGTCCTGATTGTACTGAACAATTTTTGAAGAAGTACCAGCTGAAGTTAATTATAAGGTCACATGAAGGCCCTGATGCTAGGGAAAAGAGGGATGGTTTTGAGGGAATGGCTGAAGGATACACTATTGATCATGTTGTAGATTCTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCGCAGTTTCAGGCAACGGAAAAGAGGTATAACAACAAAGGTGCTTATGTTGTCCTTGAGCCCCCAAATTTCGACACTCCTATATTCCATGGATTTTCGGCTGTAACTCCAAGGCCAAAGGCGAATCCCTATTATGATTTTGAAGAAGTGATAGACTCGGACGGAGAATTGGACTTGGCCTCCATGGTAACTTCATGA 1374 0.4469 MDLYTDPEPPPPPDSATVTVNGATTLDENPEPPPASTSPPPPSLSSPPPELQLPISWPEDGNLTIEWIQNLILCFDWSSKNLPPSQFPSVLPVQVFDSLILIASKMLHKEPNCIPIQPFRPEPESSASVVVVGDVHGQLHDVLFLFREAGYPSRDRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPENIYLLRGNHESKYCTSVYGFEKEVMVKYSDSGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVTPAKRLKGKKNRRINVNTDSKRLSLGSLEELSRARRSVLDPPWEGQNLIPGDVLWSDPSQTNGLSPNKERGIGLMWGPDCTEQFLKKYQLKLIIRSHEGPDAREKRDGFEGMAEGYTIDHVVDSGKLVTVFSAPDYPQFQATEKRYNNKGAYVVLEPPNFDTPIFHGFSAVTPRPKANPYYDFEEVIDSDGELDLASMVTS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03282 457 PRINTS Serine/threonine phosphatase family signature 288 315 IPR006186 GO:0016787
Vivi1g03282 457 PRINTS Serine/threonine phosphatase family signature 191 215 IPR006186 GO:0016787
Vivi1g03282 457 PRINTS Serine/threonine phosphatase family signature 382 398 IPR006186 GO:0016787
Vivi1g03282 457 PRINTS Serine/threonine phosphatase family signature 158 185 IPR006186 GO:0016787
Vivi1g03282 457 PRINTS Serine/threonine phosphatase family signature 228 254 IPR006186 GO:0016787
Vivi1g03282 457 PRINTS Serine/threonine phosphatase family signature 128 155 IPR006186 GO:0016787
Vivi1g03282 457 Gene3D - 86 444 IPR029052 -
Vivi1g03282 457 MobiDBLite consensus disorder prediction 1 52 - -
Vivi1g03282 457 MobiDBLite consensus disorder prediction 1 16 - -
Vivi1g03282 457 ProSitePatterns Serine/threonine specific protein phosphatases signature. 192 197 IPR006186 GO:0016787
Vivi1g03282 457 CDD MPP_PP7 57 438 IPR041754 -
Vivi1g03282 457 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 52 433 - -
Vivi1g03282 457 FunFam Serine/threonine-protein phosphatase 75 452 - -
Vivi1g03282 457 Pfam Calcineurin-like phosphoesterase 128 356 IPR004843 GO:0016787
Vivi1g03282 457 SUPERFAMILY Metallo-dependent phosphatases 88 429 IPR029052 -
Vivi1g03282 457 SMART pp2a_7 91 431 IPR006186 GO:0016787
Vivi1g03282 457 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03282 Vivi-Chr1 71387990 71392231 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03282 54 348 Calmodulin-binding Proteins AT5G63870 68.919 1.86e-152 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03282 K04460 - gmx:100802851 743.421