Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03190 ATGGTTGAATACCGAAAATGGTTGAGAAACGTTCGAAGAAAAATCCTAAGATCATCCAACAGAGACATAACTCTCCCTCCTCGTATAAGTGTTTGTACAAATCAAAGCGAACAACCAATACTTGAAAATGAATCAACCACCGTCACAACCACCAACAGGGAAGGTTTTATCAGATTACCATCACCACCGCCAATTAATTCTTCATCAACCAAATTATTCACTAAGGAAGACTTTGCAGCAATTAAGATTCAAGCTCATTTCAGGGGTCATCTCGCAAGACGAGCACATAAGGCGTTGAAAAGTTTAGTGAAACTGCAAGCATTGGTTCGTGGGGTGTGCGTGAGGAGACAATCGCGTATAGCAATGCAGTGTATGCATGCACTTGTTCGTTTACAAGTTAGGGTTCGTGCAAGGCAATTGCTTGGTACCTTTGATCATACTCAATAA 447 0.4116 MVEYRKWLRNVRRKILRSSNRDITLPPRISVCTNQSEQPILENESTTVTTTNREGFIRLPSPPPINSSSTKLFTKEDFAAIKIQAHFRGHLARRAHKALKSLVKLQALVRGVCVRRQSRIAMQCMHALVRLQVRVRARQLLGTFDHTQ 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03190 148 PANTHER IQ-DOMAIN 5-RELATED 39 139 - -
Vivi1g03190 148 SMART iq_5 98 119 IPR000048 GO:0005515
Vivi1g03190 148 SMART iq_5 75 97 IPR000048 GO:0005515
Vivi1g03190 148 ProSiteProfiles IQ motif profile. 100 127 IPR000048 GO:0005515
Vivi1g03190 148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 120 IPR027417 -
Vivi1g03190 148 Gene3D - 73 127 - -
Vivi1g03190 148 ProSiteProfiles IQ motif profile. 76 104 IPR000048 GO:0005515
Vivi1g03190 148 Pfam IQ calmodulin-binding motif 79 97 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03190 Vivi-Chr1 69604050 69605091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03190 41 141 IQD Protein Family AT3G51380 61.386 5.14e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03190 - - cam:101507643 181.8