Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03161 ATGATGAACCTTTCCACCTCTAAATCTTTCTATGTTTGTTCTTTCCTAGTTTTGTTTTATCCATTTGTTGTGACAGCTACATTTAAATCTCGTTATAAAAACTACACATTTCCTGCTTTAATTGCATTTGGTGATTCAGTCTTGGATACAGGTAACAACAATTATATTGAAACAATATTGAAGTCGGATTTCAAACCATACGGTAAAGATTTTATCGGAGGAGAAGCGACAGGAAGATTTAGCAACGGAAAAATCCCGTCAGATTTTTTCGCTGAATACTTTGGAATTAAGGAGCTTGTGCCGCCCTATCTTAATCCGAATTTGACTACTGAAGAACTCTTAACTGGAGTGTCTTTTGCGTCGGCTGGTTCAGGATATGATCCTCTAACAATTGAACTAGCATCAGTGTTGTCAACAGAGGATCAACTAGAAATGTTCAAGGACTATATAGCAAAATTGAAGGAAATTGTGGGGGAGAATAGAACAACTGAGATTATAAAAAATAGCTTACTAATCATAAGTATGGGAAGCAATGATATTTCAGGAACATATTATACGTCACCATTCAGAAAGGATGAGTATGATATAGAAAATTATACAACTATGCTCATTAGTGCATCTTCAAATTTTGTTGAGGAACTTTATCAATTGGGAGCGAGAAGGATGGGAGTATTCAGTTTACCACCAATAGGATGTTTGCCGCTGCAAAGAACTGTAAAAGGAGGCATAGATAGAGATTGTGTAGAAATTGTAAATGAGGGAGCATTGATTTTCAACTCCAAGCTTTCTTCTTCACTTGTGGATTTAGGAAAAAAGCATCCAGATTCTAGGCTTGTTTACCTTGAAAATTATAAGGAAACGCATGAGATTATCTCAAACCACACTCACTATGGATTTGAAAATGAGGATGCTGCATGCTGTGGAATAGCAAATATAGAACTTGGTCCACTGTGTAGTTCTTTCACGTTAAAAGTTTGTGCAAATACATCTGAATATGTGTTCTGGGACAGTTATCACCCCACAGAAAGAGCTTACAAAATAATTGTGAAACAAGTCTTAGATAACAAGATAGATGAGTTTCTTTGA 1086 0.3582 MMNLSTSKSFYVCSFLVLFYPFVVTATFKSRYKNYTFPALIAFGDSVLDTGNNNYIETILKSDFKPYGKDFIGGEATGRFSNGKIPSDFFAEYFGIKELVPPYLNPNLTTEELLTGVSFASAGSGYDPLTIELASVLSTEDQLEMFKDYIAKLKEIVGENRTTEIIKNSLLIISMGSNDISGTYYTSPFRKDEYDIENYTTMLISASSNFVEELYQLGARRMGVFSLPPIGCLPLQRTVKGGIDRDCVEIVNEGALIFNSKLSSSLVDLGKKHPDSRLVYLENYKETHEIISNHTHYGFENEDAACCGIANIELGPLCSSFTLKVCANTSEYVFWDSYHPTERAYKIIVKQVLDNKIDEFL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03161 361 Gene3D SGNH hydrolase 27 357 IPR036514 -
Vivi1g03161 361 CDD SGNH_plant_lipase_like 38 355 IPR035669 -
Vivi1g03161 361 SUPERFAMILY SGNH hydrolase 40 354 - -
Vivi1g03161 361 PANTHER GDSL ESTERASE/LIPASE EXL3 19 352 - -
Vivi1g03161 361 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 40 51 IPR008265 GO:0006629|GO:0016298
Vivi1g03161 361 Pfam GDSL-like Lipase/Acylhydrolase 41 351 IPR001087 GO:0016788
Vivi1g03161 361 FunFam GDSL esterase/lipase APG 29 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03161 Vivi-Chr1 69262085 69263696 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03161 34 355 Pollen Coat Proteome AT1G75910 39.755 7.23e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03161 - - mtr:11443183 558.14