Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03157 ATGAAATCACCCTTTCATCATGAATTGATTTGTTGGTGTTGTTTCATAGCCATCCTCTTACAACATGTTTCTTCTGTGAATCTACCAAACAATGAAACAGTGCCAGCAGTTTTTGTATTTGGTGACTCATTAGTTGATCCAGGAAACAACAACTATATCACCACTATTGTCAAATGTAATTTTCCACCATATGGTAGAGATTTTCAAGGAGGAAATCCAACTGGCAGGTTCAGCAATGGTGTAGTCCCATCAGACATCATTGCTGAAAAATTTGAAGTCAAGAAGATTTTACCTGCTTATCTTGATCCTAAGTTGCAACTTCAAGATCTCCTCACCGGTGTAAGCTTTGCCTCAGGTGGTTCGGGATATGATCCTCTTACTTCGAAAATAATGTCTGTGAAGTCATTATCAGATCAATTAGAATGGTTCAAGGAATACAAGAAGAAGATGGAGGAAGCAGTTGGAAGAAAGAATATGACATTGATATTATCAAAGAGCATATACATAGTGTGTATAGGAAGTGATGACATTGCTAATACTTATGCTCAAACACCGTTTAGGCGTGTCCAATATGATATTCCAGCATACACAGATTTCATGGCTTCTGAAGCCTCAAAATTCTTACAGAAACTATATGGAGAAGGAGGTAGAAGGATTGGAGTATTCAACATACCAGTTATAGGGTGTGTGCCATCTCAAAGAACACTCAATGGAGGCATTTTTAGAGAATGTTCAAACACTTCTAATAATGCAGCAAAACTCTTCAACACTAAGCTCTACTTCAATCTGAAAACACTTGAGAGAAATTATTCAGATGCTAAATTTGTGTATCTTGATTGTTACAATCCATTCTTAGAGATCATCCAAAATCCATCTAAGTATGGTTTCAATGAGACGGAGAAAGGTTGCTGTGGTACAGGGAATATAGAAGTTGGGATATTGTGCAACCGTTTCAGCATGAACACATGTTCGAATCCTTCTGATTATGTGTTTTGGGATAGTTATCATCCTACAGAAAAGGCTTATTATGCACTTAGTACACTTGTGCTTGATAACAAAATCAAGGACTTTTTTTAA 1077 0.3677 MKSPFHHELICWCCFIAILLQHVSSVNLPNNETVPAVFVFGDSLVDPGNNNYITTIVKCNFPPYGRDFQGGNPTGRFSNGVVPSDIIAEKFEVKKILPAYLDPKLQLQDLLTGVSFASGGSGYDPLTSKIMSVKSLSDQLEWFKEYKKKMEEAVGRKNMTLILSKSIYIVCIGSDDIANTYAQTPFRRVQYDIPAYTDFMASEASKFLQKLYGEGGRRIGVFNIPVIGCVPSQRTLNGGIFRECSNTSNNAAKLFNTKLYFNLKTLERNYSDAKFVYLDCYNPFLEIIQNPSKYGFNETEKGCCGTGNIEVGILCNRFSMNTCSNPSDYVFWDSYHPTEKAYYALSTLVLDNKIKDFF 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03157 358 Pfam GDSL-like Lipase/Acylhydrolase 37 346 IPR001087 GO:0016788
Vivi1g03157 358 CDD SGNH_plant_lipase_like 35 352 IPR035669 -
Vivi1g03157 358 Gene3D SGNH hydrolase 22 353 IPR036514 -
Vivi1g03157 358 PANTHER GDSL ESTERASE/LIPASE EXL3 17 346 - -
Vivi1g03157 358 FunFam GDSL esterase/lipase APG 26 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03157 Vivi-Chr1 69208514 69210955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03157 13 353 Pollen Coat Proteome AT1G75910 39.080 3.41e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03157 - - mtr:11443183 589.341