Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03148 ATGGGTTCTATTGAAATTCAAAGCTCAGAACCTGAGATTGTCACCGTTGATGTGCTTGCAGCCAAGTCTCTCATCCAGACCACCCATGTTTATCTTGATGTCAGAACGGCGGAGGAGTTTCAGAAAGGACATGTGGATTCAGACAAGATCATTAACATTGCATACATGTTTAATACACCCGAGGGGAGGGTGAAGAACCCAGATTTTTTGAAGGAGGTTTTGTCTCTTTGCAAGAAAGAAGATCATCTCATAGTGGGTTGCCAAAGTGGAGTGAGATCTGTATATGCAACTGTTGATCTTCTGGCTGAAGGGTTTAAGGATGTCTCCAACATGGGTGGAGGTTATTTGGATTGGGTTAAAAAGGAATTTCCTGTCAAGATACATGTCACTAAATAG 396 0.4217 MGSIEIQSSEPEIVTVDVLAAKSLIQTTHVYLDVRTAEEFQKGHVDSDKIINIAYMFNTPEGRVKNPDFLKEVLSLCKKEDHLIVGCQSGVRSVYATVDLLAEGFKDVSNMGGGYLDWVKKEFPVKIHVTK 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03148 131 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Vivi1g03148 131 PANTHER THIOSULFATE SULFURTRANSFERASE 18 7 127 IPR044684 GO:0003824
Vivi1g03148 131 CDD RHOD 30 119 - -
Vivi1g03148 131 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 125 IPR036873 -
Vivi1g03148 131 SMART rhod_4 16 124 IPR001763 -
Vivi1g03148 131 Pfam Rhodanese-like domain 24 120 IPR001763 -
Vivi1g03148 131 Gene3D - 4 127 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03148 Vivi-Chr1 69057292 69058699 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03148 3 125 Sulfurtransferasese or Rhodanese AT5G66170 54.472 1.41e-48 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03148 - K15692 cam:101497130 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03148 1 69057292 69058699 Vivi1g03148 1 69057292 69058699 ECH
Vivi2g02839 2 124779364 124780872 Vivi1g03148 1 69057292 69058699 PCT