Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03147 ATGGGTTCTATTGAAATTCAAAGCTCAGAACCTGAGATTGTCACCGTTGATGTGCTTGCAGCCAAGTCTCTCATCCAGACCACCCATGTTTATCTTGATGTCAGAACGGTGGAGGAGTTTCAGAAAGGGCATGTGGATTCAGACAAGATCATTAACATTGCATACATGTTTAATACACCCGAGGGGAGGGTGAAGAATCCAGATTTTCTGAAGGAGGTTTTGACTCTTTGCAAGAAAGAAGATCATCTCATAGTGGGTTGCCAAAGTGGAGTGAGATCTGTATATGCAACTGTTGATCTTCTGGCTGAAGGGTTTAAGGATGTGACCAACATGGGTGGAGGTTATCTGGACTGGGTTAAAAAGGAATTTCCTGTCAAGATACATGTCACCAAATAG 396 0.4293 MGSIEIQSSEPEIVTVDVLAAKSLIQTTHVYLDVRTVEEFQKGHVDSDKIINIAYMFNTPEGRVKNPDFLKEVLTLCKKEDHLIVGCQSGVRSVYATVDLLAEGFKDVTNMGGGYLDWVKKEFPVKIHVTK 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03147 131 Gene3D - 4 127 IPR036873 -
Vivi1g03147 131 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Vivi1g03147 131 CDD RHOD 30 119 - -
Vivi1g03147 131 PANTHER THIOSULFATE SULFURTRANSFERASE 18 7 127 IPR044684 GO:0003824
Vivi1g03147 131 SMART rhod_4 16 124 IPR001763 -
Vivi1g03147 131 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 125 IPR036873 -
Vivi1g03147 131 Pfam Rhodanese-like domain 24 120 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03147 Vivi-Chr1 69050030 69051230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03147 3 125 Sulfurtransferasese or Rhodanese AT5G66170 53.659 4.35e-48 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03147 - K15692 cam:101497130 234.572