Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03146 TTAGGGCAGGTTGCTACAGATCCCAATAATCATTTTAACACTCAAAATTCTGCTAATTTTCCATTTAACCAAAATCCCAACAATTTTCAAAATCCCAACAATTATCAAAATCCCAACTATTATCAAAATCCAAATCAATTTTCCAACCAACATCCTCAAAACATACCTAATTTTGGTTTTCCACCAAATTTCAACCAGTCATCCTCTGTTCCAAACTTTCAACCATATTATGGATCTATGCCGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGCGAATGCAAATTTTCCAAGTGGTGGTGTACCTGAATTTCCCGAATTTTCAACACAACTAACTATTGGTGGCATGATAGTTTCTAATGAAGTCGCTCCAAATTCAGAGGATTCAACTCCTAAGAGCAGGAAAACTCAGCAACCAGCATGGAACACTAAACAAAATTTGGTGCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTAAAATTGCTGAGTATTGTAATGAGCATTGCTCATTCGATCCTCCGCGTGATGGACCTGCATGCCGAAACCGTTTTAATTATATGAACAAAATGTTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCGTATGCAAGGAAGTGGTTGGTCGGAGAATGATGTTTTGGCAAAAGCGCAGGAATTATATGCATGTGGGAAGAATGTTAGATTCACTTTAATGGAAGAATGGCACGCTCTCCGTGATCAACCATGTTATGGTAGTCAAGTAGGAGGAAATATTGGCTCAGGAAGTAGTGGATCTAAGAGATCTCGCGAGAGTGATGCATGTGGCTCAAACACTGTAGAATCAAGTGCTCGTCCTATAGGAAGGGAGGCAGCTAAAAAAAAGGGTAAAAAGAAAAGCAAGGAATATGCCTCGGAGGTGGTGGACAAAGAATGGGTTGAATACAAAGAATTCAAGACGAAAGAGCTTGAACGATTGGACAACATAGCCTTGATGCAACAGCAGGCTAACAATATAGCCTTGGAAAAGACTAAAACTAAGAAAATGAAGATGTATCTAAAGCTAACTTCCGAAGAGCATCTAGATGACCGGAAGAAACAGCTGTTGAAAAAGTTGGAAGCCTACAATCAAAATCGTGAAATTGAAGAAAATTATATAGTCAATCGATTTAGAGAGCGTAGAAACAAAATATCGGAAGATAATGCACCTCGTAGTAGAAAATATCTCAATAGAGATCATGCAGCGGAAAACCAAAGACTAATTGACGACTACTTTGCCAATGAGCCTACATATGACGATGCAATGTTTCGTCGTCGGTACCGGATGAAAAAAAATGTTTTCCTTCGAATCGTTGGGGACCTTTCAAGTAGTGATAACTACTTCACCCAACGAGTTGATGCAGCCAATAAAGAAGGTATATCACCCTTAGCAAAATGTACCACAGCAATGCGAATGTTAGCATATGGTGTGGCAGCAGATGCGGTCGATGAGTACATCAAAATAGGAGGTACTACAGCATTGAAGTGCTTACGTAGATTCTGTAAAGGAATCATACGCTTGTACGAGCAAGTGTATCTGAGAGCACCAACCCAAGATGACCTGCAAAGAATACTGCATGTTAGTGAAATGCGGGGGTTCCCAGGGATGATTGGGAGTATTGACTGCATGCACTGGGAGTGGAAAAATTGTCCTAAAGCATGGGAAGGACAATTTACTAGAGGGGATAAGGGAACCACCACAGTTATTCTTGAAGCAGTTGCATCTCATGACCTATGGATCTGGCATGCCTTTTTTGGATGTCTGGGAACGTTGAACGATATAAACGTTCTAGACCGGTCACTAGTGTTTGATGACGTGGAACAGGGAAAGGCTCCAAGTGTGAATTTCTTTGTGAATCAACGTCCATATAATATGGCATACTATCTAGCTGATGGTATCTACCCTTCTTATCCAACTTTCGTCAAATCGATTAGACTTCCTCAAAGTGAACCCGATAAATTATTTGCAAAATTTCAGGAGGGATGTCGGAAGGACATCGAACGTGCATTTGGAGTGCTCCAAGCTCGATTTAAAATCATCCGTGAACCAGCTCGCTTGTGGGACATAGCTGATTTGGGTATCATCATGAGGTCATGCATCATATTACATAATATGATTGTTGAGGATGAACGAGATTCATATTCTCAACGTTGGACCGATTTTGAGCAATCTGGGGAAAGTGGATCTAGTGCACCACAACCATACTCGACCGAGGTGTTACCCGCTTTTGCAAATCATGTGCGTGCTAGATCAGAGTTCCGTGATCCAAATGTTCATCAAGAATTGCAAGCCGATCTAGTGAAGCACATATGGACAAAGTTTGGAATGTTCCGTGATTGA 2418 0.4098 LGQVATDPNNHFNTQNSANFPFNQNPNNFQNPNNYQNPNYYQNPNQFSNQHPQNIPNFGFPPNFNQSSSVPNFQPYYGSMPRNPSQTPPFNGYVTMANANFPSGGVPEFPEFSTQLTIGGMIVSNEVAPNSEDSTPKSRKTQQPAWNTKQNLVLISGWIKFGTSSVVGRNQKGETYWGKIAEYCNEHCSFDPPRDGPACRNRFNYMNKMLGKWIGAYDGAKRMQGSGWSENDVLAKAQELYACGKNVRFTLMEEWHALRDQPCYGSQVGGNIGSGSSGSKRSRESDACGSNTVESSARPIGREAAKKKGKKKSKEYASEVVDKEWVEYKEFKTKELERLDNIALMQQQANNIALEKTKTKKMKMYLKLTSEEHLDDRKKQLLKKLEAYNQNREIEENYIVNRFRERRNKISEDNAPRSRKYLNRDHAAENQRLIDDYFANEPTYDDAMFRRRYRMKKNVFLRIVGDLSSSDNYFTQRVDAANKEGISPLAKCTTAMRMLAYGVAADAVDEYIKIGGTTALKCLRRFCKGIIRLYEQVYLRAPTQDDLQRILHVSEMRGFPGMIGSIDCMHWEWKNCPKAWEGQFTRGDKGTTTVILEAVASHDLWIWHAFFGCLGTLNDINVLDRSLVFDDVEQGKAPSVNFFVNQRPYNMAYYLADGIYPSYPTFVKSIRLPQSEPDKLFAKFQEGCRKDIERAFGVLQARFKIIREPARLWDIADLGIIMRSCIILHNMIVEDERDSYSQRWTDFEQSGESGSSAPQPYSTEVLPAFANHVRARSEFRDPNVHQELQADLVKHIWTKFGMFRD 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03146 805 PANTHER OS12G0169200 PROTEIN 383 744 - -
Vivi1g03146 805 MobiDBLite consensus disorder prediction 126 146 - -
Vivi1g03146 805 MobiDBLite consensus disorder prediction 269 297 - -
Vivi1g03146 805 MobiDBLite consensus disorder prediction 269 313 - -
Vivi1g03146 805 Coils Coil 371 398 - -
Vivi1g03146 805 MobiDBLite consensus disorder prediction 127 146 - -
Vivi1g03146 805 Pfam Plant transposon protein 537 739 IPR006912 -
Vivi1g03146 805 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03146 Vivi-Chr1 69032240 69035462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03146 90 372 Glutathione S-transferase Gene Family AT5G41240 26.230 7.24e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03146 - - vvo:131640796 1543.87