Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03137 ATGCTCTCAGTATCATTCCCCTCATCTCTCAGCACCGCCGCTATTTTCCCCCGCAAAACCATCTCATCAAAACCCTGCCACGTTACACCGCGAAGAGTTTTCGTTTCTGCCACCGCCACCACTACCGAAGCTATCTCTACTCAGCTTCCTCACCGCATGGCTTCCTCCTCGCTTTACGAGATTCTTGGAATTGAGGCTGCCGCTTCCGATCAGGAGATTAAGGCGGCATACCGGCGACTCGCGAGAGTTTCTCATCCTGACGTGGCGGCGGTTGATCGGAAGAATTCTTCGGCGGATGAGTTCATGAAGATTCATGCTGCGTACTCGACTTTGTCGGATCCTGAGAAGCGTGCGAGTTATGATAGAAGTTTGTTCCGGCGTCGGCAACCGCTGACGGCGAGTAGATTTAGTGGATACAGTTGTCGGAACTGGGAAACGGACCAGTGCTGGTAG 453 0.532 MLSVSFPSSLSTAAIFPRKTISSKPCHVTPRRVFVSATATTTEAISTQLPHRMASSSLYEILGIEAAASDQEIKAAYRRLARVSHPDVAAVDRKNSSADEFMKIHAAYSTLSDPEKRASYDRSLFRRRQPLTASRFSGYSCRNWETDQCW 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03137 150 SMART dnaj_3 56 116 IPR001623 -
Vivi1g03137 150 SUPERFAMILY Chaperone J-domain 52 127 IPR036869 -
Vivi1g03137 150 ProSitePatterns Nt-dnaJ domain signature. 101 120 IPR018253 -
Vivi1g03137 150 ProSiteProfiles dnaJ domain profile. 57 124 IPR001623 -
Vivi1g03137 150 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 8 133 - -
Vivi1g03137 150 Gene3D DnaJ domain 43 140 IPR036869 -
Vivi1g03137 150 Pfam DnaJ domain 58 121 IPR001623 -
Vivi1g03137 150 CDD DnaJ 59 113 IPR001623 -
Vivi1g03137 150 PRINTS DnaJ domain signature 96 116 IPR001623 -
Vivi1g03137 150 PRINTS DnaJ domain signature 59 77 IPR001623 -
Vivi1g03137 150 PRINTS DnaJ domain signature 77 92 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03137 Vivi-Chr1 68786512 68787319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03137 53 121 C2H2 Transcription Factor Family AT1G74250 43.038 2.52e-09 52.8