Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03113 ATGTCTTCATCCAGACATGGTGGCGATGAGGTTAGGGCTTCACACATACTGATCAAATACGAAGGTTCTAGAAGGAAAGCTTCGTGGAAAGATCCAGAAGGCTACGTCATCAAAAACACAACCAGAGAAAGTGCTGTTGCTCAGCTGAAGGCGATGCAAGCCGACATTGTTGCCGGTAAGGTGAAGTTTGAGGACATTGCATCTCGTTACTCCGATTGCAGTTCTGCTAAACGCGGCGGAGATCTCGGTTCCTTTGGTCATGGCCAGATGCAGAAGCCATTTGAAGATGCAGCTTTCGCTCTTAATGTTGGTGAAATGAGTGACATTGTGGAAACTGAAAGTGGAGTCCACATAATCAAGAGAACCAAGTGA 372 0.4651 MSSSRHGGDEVRASHILIKYEGSRRKASWKDPEGYVIKNTTRESAVAQLKAMQADIVAGKVKFEDIASRYSDCSSAKRGGDLGSFGHGQMQKPFEDAAFALNVGEMSDIVETESGVHIIKRTK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03113 123 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 6 123 - -
Vivi1g03113 123 FunFam Peptidyl-prolyl cis-trans isomerase Pin1 5 123 - -
Vivi1g03113 123 SUPERFAMILY FKBP-like 8 122 - -
Vivi1g03113 123 Gene3D - 6 123 IPR046357 GO:0003755
Vivi1g03113 123 Pfam PPIC-type PPIASE domain 15 122 IPR000297 GO:0003755
Vivi1g03113 123 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 8 123 IPR000297 GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03113 65 120 Sulfurtransferasese or Rhodanese AT5G19370 41.379 5.77e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03113 K09578 - gmx:100500451 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03113 1 68531317 68534244 Vivi1g03113 1 68531317 68534244 ECH