Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03111 ATGAAGCGGACGAGGAAATCTAACAGGGTTTCATGGGCTTCTGGTGGTAATCTATGTCAGGTAAAATTGTTCTTGTCTGAAGATTTCCCGTCAAAAGTTGGCTTGGTATCACACGATAATCTTGAAGCAAAAGCATCGTCATTGTTGTGTTCTAGTACTAATGATTCTATTGATTTACCTCCTGGGTTTGAAAGTAGTCATTTCCTGAACCAATCCAAGGTTGAATTCTCCCACATTCCAAAGATAAAATGGGAATGCCCTCAACCGTTTGTTTTCAGTTCTAGTTGGCTAGTTGCAGCTGGTGAAGAAAGTAGGGAAAAAGATGTTCAGAAGCTGAGAGAAATAAGAGTCCTTGAAGCAGTTTATCCCCGACTCTCTGCCATTCCTCCTAGCCCTTCTGTTTCTCTGGATGTAGAAGAAGAAGAAGATTATGATGGTAGCAATACTCCTCTGATCCCTATCATTCCCATTGAGGAGGATGAGTCCATGGCTAATTCGCCTAAATTGGAGGAAGCAGTGAACCTTCACCCCAATGTTCAGTATCCGAATTTGCATCAATATATGTCAGCAACAACTTCCATTAATTCAGACCGTAACACCTCTGGCACTGTCTCCCCGGCTGCCTGTTTATTGCCTTTCGCCGGGGTATCTTCTGGTTCGGAAGCCGATGTAGTGGCAGCCTCTGATGCTGTGGCAGCCATCCTTAAGAGTAATGAGCATGGAGGCTTAATTGATATGGATCTACTAGTTAAAATATTTAGTGACCCGAAAATGATTGAGAATTTGATCAACGAAGCCTCTAATTTAGGTGCATCCTCAAATGCAGTGTCTTTGCCCACTTCTGGATTGAAATCTGCTATTCCATCATCCCCTTTTTTTACACCTACACCTGACATGTCAGCTTCTAGGAATACACACAGTCCCATGGGTTTTTCTGGGTTGAATCCCGCAAGTCCATCTGTTTCATCTTTGAATTCTACATCTGGTAAGCCAGCAACTCTTTTTACTCCTTCAATTCCATCATATTCTACCGTGACTTCTCCACATGATAGGCCAGCAGCTGCATCAGTCCCATTTTCTAGGCCGACGGTGTCTGGTCAACCAGTATCGCCCTCTGTTTTTATGCCCACATCTACATCTGCACCTCATATGCCCAGACCCAACAGTAATTTTCACATGTCAAATGGAATGCCAACTGCTTTAAATCCGCAGCCTCAGCCAGATTCATTTCTGGCATCTGGGGCTAAGCGACCCGCCTCTTTTGCTTTTGCTTCCATGTCTTCTAGTGAACCAAGCACAGCTCCATTGCCTCCTTCTACTGGAAACCTGCATACTGTTTTCAACCATGGACAAACCATTGCTAGAACAAAGCCGTATCAAACTAGTACAGGTTCAGCATCTGCTGTAAAGGATGCCAACTATTATAAAAACCTCATTAGGCAACATGGTGCAGACGGACAAGAGAAGCCAGATCCTCAAATAGGTAACCGTCATAGTAACTTCCAAGATATGAAATTGGTACATAATAATCAAGGGGAAGTGAAACACAAAATCAAGAAACCATGCATTTATTTTAATAGCCAAAGAGGGTGCAGGAATGGTGCCAGTTGCCCCTTTCAGCATGATGTTTCAGCTCAGTCGGGGGGAGCTGGTAACTTCCTAGGGCCGAAGAATCCTAAAAGTTTTAAAATGTGA 1695 0.4354 MKRTRKSNRVSWASGGNLCQVKLFLSEDFPSKVGLVSHDNLEAKASSLLCSSTNDSIDLPPGFESSHFLNQSKVEFSHIPKIKWECPQPFVFSSSWLVAAGEESREKDVQKLREIRVLEAVYPRLSAIPPSPSVSLDVEEEEDYDGSNTPLIPIIPIEEDESMANSPKLEEAVNLHPNVQYPNLHQYMSATTSINSDRNTSGTVSPAACLLPFAGVSSGSEADVVAASDAVAAILKSNEHGGLIDMDLLVKIFSDPKMIENLINEASNLGASSNAVSLPTSGLKSAIPSSPFFTPTPDMSASRNTHSPMGFSGLNPASPSVSSLNSTSGKPATLFTPSIPSYSTVTSPHDRPAAASVPFSRPTVSGQPVSPSVFMPTSTSAPHMPRPNSNFHMSNGMPTALNPQPQPDSFLASGAKRPASFAFASMSSSEPSTAPLPPSTGNLHTVFNHGQTIARTKPYQTSTGSASAVKDANYYKNLIRQHGADGQEKPDPQIGNRHSNFQDMKLVHNNQGEVKHKIKKPCIYFNSQRGCRNGASCPFQHDVSAQSGGAGNFLGPKNPKSFKM 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03111 564 MobiDBLite consensus disorder prediction 343 368 - -
Vivi1g03111 564 MobiDBLite consensus disorder prediction 394 409 - -
Vivi1g03111 564 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 550 - -
Vivi1g03111 564 MobiDBLite consensus disorder prediction 424 445 - -
Vivi1g03111 564 MobiDBLite consensus disorder prediction 394 413 - -
Vivi1g03111 564 ProSiteProfiles Zinc finger C3H1-type profile. 517 544 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03111 Vivi-Chr1 68506721 68515360 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vivi1g03111 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03111 - - cam:101501407 639.417