Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03108 ATGAACATGGAGATAACTGGCAGCTATGAAGCACCACTCCCACTTCTCTCACTCAATCATGTCTCTATATTATGCAGATCTGTGTTAGACTCTATGAGGTTTTATGAGGAAGTTTTGGGTTTTGGTCTCATCAAACGCCCTTCCTCTTTCAAATTCAATGGAGCCTGGTTGTATAATTATGGTTTTGGAATACACCTGCTTGAGAATCCAAACTATGATGCATTTGATACCCCTATGGATGAACCACGACCCATTAATCCCAAGGACAATCACATATCTTTCCAGTGTACAGATGTTGGACTTGTGAAAATGAGGTTGGAAGAAATGGGGCTGAAGTACGTTACAGCATTGGTAGAGGATGAAGGAATTAAGGTGGAGCAGGTGTTCTTCCATGACCCAGATGGATACATGATTGAACTTTGCAACTGTGAGAATATCCCAATAGTGCCTATCTCTTCTTCTTCATGCTCTTTCAAGGCAAGAAGCCCGAGCATTAAGAAGGCTCCCACCAAGTGTGGATTCATGGAAAATGTTATGATGCGAAGCTTGAGCATGGACATGATGAACTTTGCATTTTAA 579 0.4162 MNMEITGSYEAPLPLLSLNHVSILCRSVLDSMRFYEEVLGFGLIKRPSSFKFNGAWLYNYGFGIHLLENPNYDAFDTPMDEPRPINPKDNHISFQCTDVGLVKMRLEEMGLKYVTALVEDEGIKVEQVFFHDPDGYMIELCNCENIPIVPISSSSCSFKARSPSIKKAPTKCGFMENVMMRSLSMDMMNFAF 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03108 192 PANTHER - 11 162 - -
Vivi1g03108 192 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 11 142 IPR029068 -
Vivi1g03108 192 CDD VOC_like 18 140 - -
Vivi1g03108 192 Gene3D - 12 145 IPR029068 -
Vivi1g03108 192 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 18 140 IPR004360 -
Vivi1g03108 192 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 17 143 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03108 Vivi-Chr1 68414600 68415657 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03108 31 154 Calmodulin-binding Proteins AT1G08110 25.828 3.51e-06 44.3