Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03093 ATGGATTTACTTCACCAAGCAAAAACCACGCTAGAACCATTCCCTACACTTTTATGGATCATTCTCCCACTCGCTATGTTTCTACTACTTAATATATCCTCAAAAATCCGCAAAAGAGCATCATATCCACCAGGTCCAAAAGGGTTACCCTTAATAGGTAACATGAACATGATGGACAAACTCACACATAGAGGTTTAGCAGATTTAGCTAAACAATACGGCGGCGTTTTGCACCTCCGCATGGGGTTTATTCACATGGTAGCAATCTCAAACGCAGAAGCAGCGCGTGAAGTGTTACAGTTGCATGACAACATATTCTCCAATCGCCCAGCGACGATAGCTATAAGTTATCTTACTTACAATCGCGCTGACATGGCGTTCGCTCACTACGGTCCGTTTTGGCGCCAGATGAGGAAGCTTTGTGTCATGAAACTCTTCAGCCGTAAACGGGCTGAGTCGTGGGAGTCTGTTAGAGATGAAGTTGACGTAGTTATCACCAACGTTAACGAGAATCTAGGAAACTCTGTTAACGTTGGTGAGTTGGTTTTTAACTTAACAAAGAATATTATATATCGTGCGGCTTTTGGGTCGAGTTCGAAAGAAGGACAAGACGAGTTTATTTCGATACTTCAAGAGTTTTCGAAATTGTTTGGTGCTTTTAATATTGCGGATTTTGTACCTTGTTTGAGGTGGCTTGATCCTCAAGGTTTGAATGCTAGGCTTGTGAAGGCTCGTGGTGCGTTGGATGGTTTTATTGATAAGATTTTTGATGAACATGTTGAGAAGAAGAGGAACATGAGTGGTGATGAAGATAGTGATATGGTTGATGAATTGTTGGCTTTTTACAGTGATGAAGCTAAAGTGAATAATGAATCGGATGATCTTCATAACTCTATCAAACTCACTAGGGATAATATCAAAGCCATCATCATGGATGTCATGTTCGGAGGAACAGAAACGGTTGCCTCAGCAATGGAATGGTCTATGTCGGAACTACTAAGAAATCCAGAAGAACTCAAGCGCGTGCAACAAGAACTCGCCGCGGTCGTTGGCCTAGACCGGCGCGTGGAGGAATCAGACATAGAGAAATTAACATATCTTAAATGTGTTGTCAAGGAGACACTTCGTCTTCACCCGCCGATTCCGCTTCTCCTACACGAGACAGCGGAGGATGCGACGGTTGGTGGCTATTACGTCCCCAAAGGCTCGCGCGTGATGATAAACGCGTGGGCCATTGGAAGAGATGAATTTTCATGGAAGGATCCAGAAGAGTTTAAGCCTTCAAGATTTTTAAATTCAACAAGTGCGCCTGATTTTAAAGGAAGTAATTTCGAGTTTATTCCGTTTGGGTCTGGTCGAAGATCTTGCCCAGGAATGCAATTGGGCCTGTACGCATTGGACTTAGCTTTGGCCCATTTACTTCATTGCTTTACTTGGGAGTTACCGAATGGAATAAAGCCGAGTGAGATGGACACGAGTGATGTTTTTGGACTCACTGCTCCAAGAGCGAGTCGACTCATTGCTGTTCCAGCTAAGAGGCTTGTGTGTCCTCTTTGA 1557 0.4367 MDLLHQAKTTLEPFPTLLWIILPLAMFLLLNISSKIRKRASYPPGPKGLPLIGNMNMMDKLTHRGLADLAKQYGGVLHLRMGFIHMVAISNAEAAREVLQLHDNIFSNRPATIAISYLTYNRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWESVRDEVDVVITNVNENLGNSVNVGELVFNLTKNIIYRAAFGSSSKEGQDEFISILQEFSKLFGAFNIADFVPCLRWLDPQGLNARLVKARGALDGFIDKIFDEHVEKKRNMSGDEDSDMVDELLAFYSDEAKVNNESDDLHNSIKLTRDNIKAIIMDVMFGGTETVASAMEWSMSELLRNPEELKRVQQELAAVVGLDRRVEESDIEKLTYLKCVVKETLRLHPPIPLLLHETAEDATVGGYYVPKGSRVMINAWAIGRDEFSWKDPEEFKPSRFLNSTSAPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLALAHLLHCFTWELPNGIKPSEMDTSDVFGLTAPRASRLIAVPAKRLVCPL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03093 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Vivi1g03093 518 FunFam Cytochrome P450 84A1 35 512 - -
Vivi1g03093 518 Pfam Cytochrome P450 43 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PANTHER CYTOCHROME P450 84A1-RELATED 16 518 - -
Vivi1g03093 518 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 CDD CYP71-like 72 506 - -
Vivi1g03093 518 SUPERFAMILY Cytochrome P450 43 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 Gene3D Cytochrome P450 28 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03093 518 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03093 Vivi-Chr1 68284753 68288957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03093 50 518 Monolignol Biosynthesis Gene Families AT4G36220 74.262 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03093 K09755 - gmx:100807448 824.313