Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03083 ATGAGACCCTCACCACACCATAAAAATCCATGTTCCACAGACACAGTGTGTTTACACATAGACAGTGTTGTAGAAAACAACAACAACAACAAAAATCAACACATTAATCCTACAATGAACAACAATACTGGCATGGAAGTTGAGGAGACTGTAAGAGAGTTGAGTCAATACTTCAAAACAGGAAAAACAAAAAGTGTTGCATGGAGAAAAAACCAGCTCCAAGCTTTACTTGACCTTGTTCATGAAAATGAAGATGCTATATCTAAAGCTCTTAACCAAGATCTTGGGAAGCACCCTGTTGAAGCTTACCGCGACGAGATTGGAGGGGTAGAAAAATCAGCACAAAACTCTTTGAACAGTGTTGAAAAATGGATGGCTCCTAAAAAGAGCAGTATGCCTCTTCTGTTCTTCCCTTCAAAGGGAGAGTTATTGCCAGAACCACTTGGCGTGGTTCTTATTTTTTCATCTTGGAACTTTCCGATCGTGTTGGCTTTGGATCCAATAATTGGGGCAATATCTGCTGGAAATGTTGTTCTGATAAAACCATCAGAGCAAGCTCCAGCATGCTCTTCTTTTCTTGCGAACACTATTCCTCGCTACTTGGATACTAATGCCGTAAAGGTCGTTGAGGGTGGAGGAGATGTCTGTGAAAAACTTCTGCAACATAAATTTGACAAAATATTCTTCACTGGAAGTCCAAGAGTGGCAAGCATAGTTATGACTTCTGCTGCAAGAAATTTAACTCCTGTGACTCTAGAGCTAGGTGGAAAATGTCCTGCTATATTTGATTACCTTTCCAATCCTTCAGATTTTAAGATGGCAGTGAAAAGAATAGTAGGAGCAAAGTGGGGAATCTGTAGTGGACAAGCATGCATAGGAATCGATTATGTGCTTGTTGAGGAGAAGCACTCATCTGAATTGATTGAACTATTAAAGAAGTTTGTGAGAATATTTTATGGTGATAACATGATAGAGTCAAAGGTACTGTCAAGAATAGTAAACAAACAGCACTTTCAAAGACTGTGCAATCTTCTCAAAGACCCTCTTGTTGCTGCTTCAATAGTTCATGGTGGTTCAGTTGATGAAGCAAACCTGTTTATTGAGCCAACAATCTTGTTAGATCCACCACTAGATGCTGAAATCATGACAGAAGAAATCTTTGGTCCATTTCTTCCAGTGATCACAGTGAACAAAATTCAGGAAAGTATTGAATTTATAAACTCAAAACCAAAACCTCTTGCCATCTATGCATTCACCAAAAATGAAGCTTTCAAGAGAAAGATTGTATCAGAAACATCCTCAGGAAGTGTCACATTTAATGACACACTGGTTCAATTTTTATGTGATACACTACCATTTGGAGGTGTTGGACAGAGTGGTATTGGTAGGTACCATGGAAAATACTCCTTTGACACATTCAGCCATGAAAAAGCTGTAATGCATAGATACCTTTGCCTTGAAATTGAACCAAGGTATCCTCCATGGAGTAAATTTAAGCTAGAATTTATCAGATTGGCATACAGGTTCAACTACTTTGGACTAGCACTACACATGTTGGGCTTGAAAAAACAGAACTAG 1578 0.3878 MRPSPHHKNPCSTDTVCLHIDSVVENNNNNKNQHINPTMNNNTGMEVEETVRELSQYFKTGKTKSVAWRKNQLQALLDLVHENEDAISKALNQDLGKHPVEAYRDEIGGVEKSAQNSLNSVEKWMAPKKSSMPLLFFPSKGELLPEPLGVVLIFSSWNFPIVLALDPIIGAISAGNVVLIKPSEQAPACSSFLANTIPRYLDTNAVKVVEGGGDVCEKLLQHKFDKIFFTGSPRVASIVMTSAARNLTPVTLELGGKCPAIFDYLSNPSDFKMAVKRIVGAKWGICSGQACIGIDYVLVEEKHSSELIELLKKFVRIFYGDNMIESKVLSRIVNKQHFQRLCNLLKDPLVAASIVHGGSVDEANLFIEPTILLDPPLDAEIMTEEIFGPFLPVITVNKIQESIEFINSKPKPLAIYAFTKNEAFKRKIVSETSSGSVTFNDTLVQFLCDTLPFGGVGQSGIGRYHGKYSFDTFSHEKAVMHRYLCLEIEPRYPPWSKFKLEFIRLAYRFNYFGLALHMLGLKKQN 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03083 525 FunFam Aldehyde dehydrogenase 256 459 - -
Vivi1g03083 525 Pfam Aldehyde dehydrogenase family 32 479 IPR015590 GO:0016491
Vivi1g03083 525 PIRSF ALDH 26 523 IPR012394 GO:0006081
Vivi1g03083 525 FunFam Aldehyde dehydrogenase 55 260 - -
Vivi1g03083 525 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 56 477 IPR016162 GO:0016491
Vivi1g03083 525 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 256 459 IPR016163 GO:0016620
Vivi1g03083 525 PANTHER ALDEHYDE DEHYDROGENASE 44 518 IPR012394 GO:0006081
Vivi1g03083 525 SUPERFAMILY ALDH-like 46 494 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03083 Vivi-Chr1 68117145 68120272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03083 47 523 Aldehyde Dehydrogenase Gene Family AT4G36250 61.845 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03083 K00128 - gmx:100809812 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03083 1 68117145 68120272 Vivi1g03083 1 68117145 68120272 ECH