Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03076 ATGGGATGGATCATAGGACTATGTTCTTTTATGAGTATTTTCTTAGTATCTTGGTGGATTTTATGTATGAAGAAGAAAGAAAATAGAGTGATGATGGAGAATAACAAGAAGAAAGGAAAAGTTCCAAAAGGAAACAAAGGTTGGCCTTTACTAGGAGAGACTCTTGATTTCATTGCTTGTGGATACACCTCTAATCCTCTTAGCTTCATGGAAAAACGCAAGTCTTTATATGGTAATGTGTTTAAGACAAGCATATTAGGGAGTGGTGTGATTGTGTCAACCGATCCAGAGATAAACAAAGTGATTCTACAAAATCAAGGCAACATTTTCATTCCTGCTTATCCAAAATCAATTAGAGAATTAATGGGAGAAAACTCAATACTTCAAATGAATGGGAACATGCATAGGAAACTTCATTCACTTCTTGGAGGTTTTCTTCGTTCTCCACAATTCAAAGCTCGAATCACAAAAGATATTCAGCAATCTGTTAAACAATGTTTGGCTACTTGGACCCATCATCAACCAATATATGTTCAAGATCAAGTTAAAAAGATTACTTTTACTATTTTGGTGAAAGTTCTAATGAGCATTGATCCCGGTGAAGATTTATCCATATTGAAGAGAGAATTTGAAGAGTTCATCAAAGGCTTAATTTGCTTGCCCATCAAGTTTCCTGGAACAAGACTATACAAATCCTTGAAGGCCAAGGAGAGAATGATGAAGATAGTTCAAAGGATAATAGAGGAAAGGAATGATAATAAACATAGGGATTGTGTGGCAAATGATGTAGTGGATGTACTTTTAGAAGATAATAAAGGTGAGTTGAAGAAAATGAGTGAGAATATAATTGAGATGATGATTCCTGGTGAAGAAACTCTTCCTACTGCTATGACCATGGCTGTCAAGTTTCTTAGTGACTCTCCTCTTGCTCTATCCAAATTACTGGAAGAGAACATGGAATTAAAGAGAAACAAGAATTGTTCCGATGATTATGCATGGACTGATTACTTGTCACTGCAATTCACTCAAAATGTAATCAATGAAACTCTTAGAATGTCAAATATTGTGAATGCTATTTGGAGAAAATCTATCAAAGATGTAGATATTAAAGGATACCTAATTCCTAAGGATTGGTGTGTTGTGGCTTCTCTTACATCAGTTCATTTAGATGACATCAACTACGAAAAGCCTTTTGAATTTGATCCATGGAGATGGGAGAAAATTGAAGGTGGGAATAGAAACAATTGTTTTACACCATTTGGTGGTGGACAAAGATTATGTCCAGGGATAGAACTCTCTAGGCTAGAGCTCTCTATTTTTCTTCACCATCTAGTTACAACTTACAGATGGGTTGCTGAGAGGGATGAAATTATTTACTTTCCAACAGTAAAGATGAAAAAGAAACTCCCAATTAGTGTGACACCATTAACACCTAATTGA 1440 0.3528 MGWIIGLCSFMSIFLVSWWILCMKKKENRVMMENNKKKGKVPKGNKGWPLLGETLDFIACGYTSNPLSFMEKRKSLYGNVFKTSILGSGVIVSTDPEINKVILQNQGNIFIPAYPKSIRELMGENSILQMNGNMHRKLHSLLGGFLRSPQFKARITKDIQQSVKQCLATWTHHQPIYVQDQVKKITFTILVKVLMSIDPGEDLSILKREFEEFIKGLICLPIKFPGTRLYKSLKAKERMMKIVQRIIEERNDNKHRDCVANDVVDVLLEDNKGELKKMSENIIEMMIPGEETLPTAMTMAVKFLSDSPLALSKLLEENMELKRNKNCSDDYAWTDYLSLQFTQNVINETLRMSNIVNAIWRKSIKDVDIKGYLIPKDWCVVASLTSVHLDDINYEKPFEFDPWRWEKIEGGNRNNCFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAERDEIIYFPTVKMKKKLPISVTPLTPN 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03076 479 CDD CYP90-like 73 475 - -
Vivi1g03076 479 Gene3D Cytochrome P450 30 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 SUPERFAMILY Cytochrome P450 37 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 31 476 - -
Vivi1g03076 479 PANTHER CYTOCHROME P450 26 38 451 - -
Vivi1g03076 479 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 Pfam Cytochrome P450 42 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03076 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03076 Vivi-Chr1 67795333 67800230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03076 24 449 Cytochrome P450 AT3G13730 51.270 4.69e-165 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03076 K12637 - gmx:100812489 767.303