Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03073 ATGTCAACGGCACCACCGTCCAAACGCGATAAGTTGCAATGGGAATATCCTGTTGCTGGTTTAATATCTGGATTCGCCACCTTAACCGTGAAGTATCCCCTCGACCTTGTCTCAACTAGGCTTCAAGTTAACGATGGTCGACTCTTCTCTCAATTTCCTAGATACAAGAACACCGCTCACGCCATTTTCACCATTGCTCGCTTCGACGGATTGAAAGGCCTATATGCAGGCTTTCTTGCTGGGATTCTTGGGGCAAGTATTTCATCTGGTTTAGCACTCGTTGGCTACGCAAGAGCTAAACAAAAACATGCTGAGAGAAAAGAGGAGAAGTTTAGTCCAGGTCTTGCCTCAATTGTGGAAACGGGAGTTTTGGTTTGCTTGTGCGCAAATCCTGTTTGGATAGTGAAGACAAGATTGCAGCTTCAGACTCCTCTTCATCAGACACGGCCATACTCTGGGCTCTATGATGCATTTAGGACCATAGTGAGGGAAGAAGGGTTTAGAGCACTTTTTAGAGGAATTGTTCCTGGTTTATTCCTGGTCGCTTATGGCGCTATTCATCTCACTGTATACCAGGAGCTTCATAAAACTCTTGCTCATTTGAAGACTAAAGGAAGTAATATACAACATCAAAACCCTGATAAAATTTTGAATTCTGTTGATTCTGCTATTCTTGGAGCAACCTCAAAAGCTGCTGCAATACTCCCAGCCTATCCATTTCATGTTATACGGACTCGTTTGCAGCTACGACCTGACAGTGATGGGATATCAAGATATAAGAACAGTTGGCATGTTGTGAAAGAAACAGCACGATTTGAAGGTGTTCGTGGTTTTTACAAGGGAATCACTGCAAACCTTTTGAAAAACATTCCTGCTGCTTCAATAACATTTGTTGTTTATGAAAATGTTCTAAAATTACTTAAACAGGAGAAGGAATGA 939 0.4228 MSTAPPSKRDKLQWEYPVAGLISGFATLTVKYPLDLVSTRLQVNDGRLFSQFPRYKNTAHAIFTIARFDGLKGLYAGFLAGILGASISSGLALVGYARAKQKHAERKEEKFSPGLASIVETGVLVCLCANPVWIVKTRLQLQTPLHQTRPYSGLYDAFRTIVREEGFRALFRGIVPGLFLVAYGAIHLTVYQELHKTLAHLKTKGSNIQHQNPDKILNSVDSAILGATSKAAAILPAYPFHVIRTRLQLRPDSDGISRYKNSWHVVKETARFEGVRGFYKGITANLLKNIPAASITFVVYENVLKLLKQEKE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03073 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 197 IPR018108 -
Vivi1g03073 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 306 IPR018108 -
Vivi1g03073 312 SUPERFAMILY Mitochondrial carrier 14 302 IPR023395 -
Vivi1g03073 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 102 IPR018108 -
Vivi1g03073 312 Gene3D Mitochondrial carrier domain 116 312 IPR023395 -
Vivi1g03073 312 Gene3D Mitochondrial carrier domain 3 115 IPR023395 -
Vivi1g03073 312 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 13 309 IPR044712 GO:0006862|GO:0055085
Vivi1g03073 312 Pfam Mitochondrial carrier protein 219 309 IPR018108 -
Vivi1g03073 312 Pfam Mitochondrial carrier protein 122 199 IPR018108 -
Vivi1g03073 312 Pfam Mitochondrial carrier protein 14 101 IPR018108 -
Vivi1g03073 312 FunFam Folate transporter 1, chloroplastic 108 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03073 Vivi-Chr1 67651923 67658797 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03073 33 309 Chloroplast and Mitochondria Gene Families AT1G25380 29.225 6.18e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03073 K15115 - gmx:100809599 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g03073 1 67651923 67658797 Vivi1g03073 1 67651923 67658797 ECH