Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03072 ATGTCAACGGAAGCGCCCAAGCGCGACCACTGGCAATGGGAGAACGCCATCGCCGGTGCCGCCGCCGGATTCGCCACCGTCGCCGTCATGCATCCCCTCGACGTTGTCCGAACTAGGTTTCAAGTTAACGATGGTCGAGTCTCTCATCTTCCCAGTTACAAGAACACCGCTCACGCAATTTTCACCATTACTCGCTCCGAGGGATTAAGAGGGCTATATGCAGGTTTTCTTCCTGGGGTTCTCGGGTCAACTATATCCTGGGGTTTATATTTCTTTTTCTATGACAAGGCTAAACAAAGATATGCTAGGAGCAGAGAGGAGAAGTTGAGCCCGGGTCTTCATCTTGCCTCAGCTGCGGAAGCAGGAGCCTTGGTTTGTTTTTGCACAAATCCTGTTTGGCTAGTGAAGACAAGATTGCAGCTTCAGACTCCTCTTCATCAGACACGGCCATACTCTGGGCTATATGATGCATTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCACTTTACAGAGGGATTGTTCCCGGTTTATTTCTGGTCTCTCATGGAGCTATTCAGTTCACTGCCTACGAAGAGCTGCGTAAAACTATTGTTGATTTTAAGAGCAAGAGAAGTGAAATACAAAATCAAAACCCTGATCAACTCTTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAAGTTGCTGCAATACTCCTAACCTATCCATTTCAGGTTATCCGGTCCCGGTTGCAGCAACGACCCGGTGGTGATGGGATACCAAGATATATGGACAGCTGGCATGTTGTGAAAGAAACTGCACGATTTGAAAGCGTCCGAGGTTTTTACAAGGGAATCACACCAAACCTCTTGAAAAACGTCCCTGCCTCTTCAATAACATTTATTGTTTATGAAAATGCTCTAAAATTACTAAAACTAGCTAGAAAGAATGACTGA 945 0.4571 MSTEAPKRDHWQWENAIAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSHLPSYKNTAHAIFTITRSEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARSREEKLSPGLHLASAAEAGALVCFCTNPVWLVKTRLQLQTPLHQTRPYSGLYDAFRTIMREEGFSALYRGIVPGLFLVSHGAIQFTAYEELRKTIVDFKSKRSEIQNQNPDQLLNSVDYAVLGATSKVAAILLTYPFQVIRSRLQQRPGGDGIPRYMDSWHVVKETARFESVRGFYKGITPNLLKNVPASSITFIVYENALKLLKLARKND 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03072 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 310 IPR044712 GO:0006862|GO:0055085
Vivi1g03072 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Vivi1g03072 314 FunFam Folate transporter 1, chloroplastic 106 312 - -
Vivi1g03072 314 Gene3D Mitochondrial carrier domain 1 106 IPR023395 -
Vivi1g03072 314 Gene3D Mitochondrial carrier domain 107 310 IPR023395 -
Vivi1g03072 314 SUPERFAMILY Mitochondrial carrier 12 301 IPR023395 -
Vivi1g03072 314 FunFam folate transporter 1, chloroplastic isoform X1 1 105 - -
Vivi1g03072 314 Pfam Mitochondrial carrier protein 109 199 IPR018108 -
Vivi1g03072 314 Pfam Mitochondrial carrier protein 11 103 IPR018108 -
Vivi1g03072 314 Pfam Mitochondrial carrier protein 220 308 IPR018108 -
Vivi1g03072 314 Coils Coil 191 211 - -
Vivi1g03072 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 306 IPR018108 -
Vivi1g03072 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03072 Vivi-Chr1 67640920 67645813 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03072 32 307 Chloroplast and Mitochondria Gene Families AT2G47490 37.102 1.78e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03072 K15115 - gmx:100809599 555.444