Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g03006 ATGTCTAACCCACTCTTGACTTTGTGTTTTCTTTCTTCCATTCTTGCTCTCACTTTGTTCTTCTTTTTCATCAAAAGAAAGAAAACAAAGTTTTATCTTCCACCTGGAAAAATGGGGTGGCCCTTTATTGGAGAAACCATTGGTTATTTGAAGCCTTATTCCGCCACTACAATGGGAGAATTTATGGAGAATCACATAGCAAGGTATGGTACAATTTACAAGTCAAACTTGTTTGGAGAACCAGCAATTGTATCAGTAGATGCAGAGTTCAATAAGTTCATATTACAAAATGATGGAAAATTGTTTGAGGTTAGTTATCCTAGAAGCATTGGTGGAATACTTGGGAAATGGTCAATGTTGGTTTTAGTAGGTGACATGCATAGAGACATGAGGAATATTTCACTTAATTTCATGAGCCATGCTAGGCTTAAAACACATTTTTTGAAAGATATGGAGAATCATACCCTTTTGGTTTTAAGCTCTTGGAAAAATGATTGTACATTCTCAGCTCAAAGTGAAGCAAAAAAGTTCACCTTCAATTTAATGGCGAAACAAATCATGAGTTTGGATCCATGGAATCTTGAGACAGAAGAGTTGAAAAAAGAGTATGTCTCTTTTATGAAAGGTGTTGTTTCTGCTCCTTTGAATTTGCCAGGAACTGCATACAGAAAGGCATTAAAGTCTAGGAAGACCATATTGAAGTTCATAGAGAGAAAAATGGAAGAAAGAATGAAAAGAATGCAAGAAGGAAAAAAAGGATTGGAAGAAAATGATCTTTTGAATTGGGTTCTAAAGCATTCAAATCTTTCAACTGAGCAAATTCTTGACTTGATTCTGAGTTTGCTGTTTGCTGGTCATGAAACATCATCTGTAGCTATATCTCTAGCCATCTACTTTTTGCCTGGTTGTCCTCAAGCTATGGAACAATTAAGGGAAGAACATAGAGAAATAGCCAGGTGCAAAAAGAAAGCTGGAGAAAATGAATTAACTTGGGATGATTATAAAAAAATGGATTTTACTCATTGTGTTGTGAATGAAACACTAAGATTGGGAAATGTTGTGAGGTTCCTCCATAGGAAGGCTATCAAAGATGTTTGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTTCTTCCTGTGATTTCAGCGGTGCATTTAGATCCTTCAAATTTTGACCAACCTCAACACTTCAATCCTTGGAGATGGAAGGGTAATAGTAAATATGGAAATTGTGGAAATATAAACAGTAACTTTATGCCATTTGGAGGAGGACCAAGACTATGTGCAGGATCAGAGTTAGCTAAACTTGAAATGGCAGTTTTCATACACCATATTATCCTGAACTATAATTGGGAGCTAGTTGATGTTGTTGATCAACCTATTGCATACCCTTTTGTTGAGTTTCCTAAAGGTCTACAAATCAGAGTCCAAACCCAACCCCAAGCCCAAACCTAA 1458 0.3635 MSNPLLTLCFLSSILALTLFFFFIKRKKTKFYLPPGKMGWPFIGETIGYLKPYSATTMGEFMENHIARYGTIYKSNLFGEPAIVSVDAEFNKFILQNDGKLFEVSYPRSIGGILGKWSMLVLVGDMHRDMRNISLNFMSHARLKTHFLKDMENHTLLVLSSWKNDCTFSAQSEAKKFTFNLMAKQIMSLDPWNLETEELKKEYVSFMKGVVSAPLNLPGTAYRKALKSRKTILKFIERKMEERMKRMQEGKKGLEENDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAISLAIYFLPGCPQAMEQLREEHREIARCKKKAGENELTWDDYKKMDFTHCVVNETLRLGNVVRFLHRKAIKDVWYKGYDIPCGWKVLPVISAVHLDPSNFDQPQHFNPWRWKGNSKYGNCGNINSNFMPFGGGPRLCAGSELAKLEMAVFIHHIILNYNWELVDVVDQPIAYPFVEFPKGLQIRVQTQPQAQT 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g03006 485 CDD CYP90-like 65 477 - -
Vivi1g03006 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Vivi1g03006 485 Gene3D Cytochrome P450 24 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 PANTHER CYTOCHROME P450 26 30 461 - -
Vivi1g03006 485 Pfam Cytochrome P450 34 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 SUPERFAMILY Cytochrome P450 30 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 FunFam Cytochrome P450 90B1 23 479 - -
Vivi1g03006 485 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g03006 485 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g03006 Vivi-Chr1 65972883 65976442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g03006 25 408 Cytochrome P450 AT3G50660 72.593 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g03006 K09587 - gmx:100789515 778.089