Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02985 ATGAGAGTTCCTCCTCCTGCAGTTTCCTCATCATCATCATCATCCCCAAAACTGATCACCACCACCCAAAACACCCTCCTCACCACTCCCAACCCAACAACAACCACCACAACCACCACCACCACCTTGTGCTACGAGCCCCGCTCCGTTCTCGAACTCTGCCGTAGTCCTAGCCCTGAAAAGAAACCAACTCAACAACAACTACAAGAACAAGAACACCTAGAAGTGGAAGAGGATCATGCTTCCTTGCCTAATTTGGATTGGTGGGATTCCATCATGAAGGATTTGGGTTTACAAGACGACTCTTCCACACCCATAATACCCCTTCTCAAAAACACTAACAACACCCACGAAAATTCTACCCCAACACCATGCATCCCTGAAATTTACCCAAACCCTTCTCAAGACCAATTTGATCAAACTCAAGATTTCACTTCTCTCTCAGATATTTACTCTAATAATCAAAACCTCCCCTATAATTACCCAAACACAAACACTAATCTGGATCATTTACTTCATGACTTCAATAACAACCAACACAACAACAATAATAACAATAGTAACTGGGATTTCATTGAAGAGCTTATTCGCGCCGCGGATTGTTTCGATAACAACCATCTTCAACTAGCTCAGGCCATATTAGAGCGGCTCAATCAACGGCTCCGATCTCCCTCAGGTAAACCGTTGCACCGAGCAGCGTTTCATTTCAAAGACGCTCTTCAGTCTCTTCTCTCCGGTTCGAACCGGACTAATCCTCCGCGTCTTTCTTCCATGGTGGAGATTGTTCAGACCATTAGAACGTTCAAGGCGTTTTCTGGAATTTCACCGATTCCTATGTTTTCTATTTTTACAACTAATCAAGCGTTACTCGAAGCGCTTCATGGATCATCGTTCATGCATGTTGTTGATTTTGAAATCGGACTTGGAATTCAGTATGCTTCTCTGATGAAAGAGATTGCTGAAAAGGCGGTTAACGGTTCGCCGCTTCTCCGTATCACGGCGGTGGTGCCGGAGGAGTACGCGGTTGAGAGCAGGCTTATTCGTGAGAATCTCAACCAGTTTGCGCATGATCTTGGAATTCGCGTGCAGGTTGATTTTGTGCCGTTAAGGACTTTTGAAACGGTGTCGTTTAAGGCTGTTAGGTTCGTCGATGGTGAGAAGTCTGCGATTCTGTTGACGCCGGCGATATTCTGCCGCCTAGGATCGGAAGGCACGGCCGCGTTTCTCTCGGATGTTCGGAGAATAACTCCTGGTGTGGTGGTTTTTGTGGATGGTGAAGGATGGACGGAAGCGGCTGCCGCGGCGTCGTTTCGACGCGGTGTTGTGAATAGCTTGGAGTTCTACTCGATGATGCTGGAGTCGCTGGATGCGTCGGTGGCGGCAGGAGGTGGAGGAGAGTGGACGCGGAGGATCGAGATGCTTCTTCTACGGCCGAAGATAATTGCGGCGGTGGAGGCTGCTGGAAGAAGAACGACACCGTGGCGAGAGGCGTTTTACGGTGCCGGAATGAGGCCGGTGCAGTTGAGTCAGTTTGCGGATTTTCAGGCGGAGTGTTTGCTCGCAAAGGTGCAAATCAGAGGCTTCCACGTGGCAAAACGACAAGCTGAGTTGGTGCTTTTCTGGCATGAGAGGGCCATGGTCGCCACGTCAGCTTGGCGGTGTTAG 1665 0.4889 MRVPPPAVSSSSSSSPKLITTTQNTLLTTPNPTTTTTTTTTTLCYEPRSVLELCRSPSPEKKPTQQQLQEQEHLEVEEDHASLPNLDWWDSIMKDLGLQDDSSTPIIPLLKNTNNTHENSTPTPCIPEIYPNPSQDQFDQTQDFTSLSDIYSNNQNLPYNYPNTNTNLDHLLHDFNNNQHNNNNNNSNWDFIEELIRAADCFDNNHLQLAQAILERLNQRLRSPSGKPLHRAAFHFKDALQSLLSGSNRTNPPRLSSMVEIVQTIRTFKAFSGISPIPMFSIFTTNQALLEALHGSSFMHVVDFEIGLGIQYASLMKEIAEKAVNGSPLLRITAVVPEEYAVESRLIRENLNQFAHDLGIRVQVDFVPLRTFETVSFKAVRFVDGEKSAILLTPAIFCRLGSEGTAAFLSDVRRITPGVVVFVDGEGWTEAAAAASFRRGVVNSLEFYSMMLESLDASVAAGGGGEWTRRIEMLLLRPKIIAAVEAAGRRTTPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRQAELVLFWHERAMVATSAWRC 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02985 554 Pfam GRAS domain family 192 553 IPR005202 -
Vivi1g02985 554 MobiDBLite consensus disorder prediction 55 79 - -
Vivi1g02985 554 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 169 548 IPR005202 -
Vivi1g02985 554 ProSiteProfiles GRAS family profile. 182 553 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02985 Vivi-Chr1 65211430 65213592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02985 73 553 GRAS Transcription Factor Family AT4G36710 55.510 4.13e-167 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi1g02985 GRAS 1.5e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02985 - - cam:101510420 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02985 1 65211430 65213592 Vivi1g02985 1 65211430 65213592 ECH