Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02984 ATGGGGACTAAGGAGGATAGTACAACTAAGCCTTCTAAATTATCTAGTTCAACTCAAGAGGTACCAGTACCAACTGTACCGCCATCGTATCCAGATTGGTCAAGCTCCATGCAGGCTTACTATAATCCTGGAGCTGCTCCGCCTCCTTATTATGCCTCGACTGTTGCTTCCCCGACCCCCCATCCGTATATGTGGGGAGGCCAGCATCCTTTAATGGCGCCATATGGTACTCCAGTTCCGTATCCAGCTATGTACCCTCCTGGGAGTATCTATGCTCATCCTAGCATGGTAGTGACTCCGGGTGCTGTGCACCAAACTACGGAGTTTGAAGGGAAGGGACCTGATGGAAAGGATAAAGATTCATCGAAAAAATCAAAGGGAAATTCTGCAAATGCATGTGCCAAAGCAGGAGAGAGTGGAAAAGCAGGCTCGGGTTCAGGCAATGATGGCTTTTCACAAAGTGGTGAAAGTGGTTCAGAGGGTTCATCGAATGGTAGTGACGAGAACCAACAGGAATCAGCTAGAAACAAGAAGGGAGGTTTTGACCTCATGCTTGTTGATGGAGCCAACGCACAGAACAATACCGCCGGAGCCATTTCTCAATCACCGGTTCCTGGAAACCCTGTTGTCTCGATGCCTGCAACTAATCTTAATATGGGAATGGACTTATGGAATGCATCTTCTGCTAGTGCCGAAGCCGCAAAAATGCGACACAATCAATCTGGTGCTCATGGGGCCGGTGGACATGGTGAACAATGGATGCAGCAGGATGACCGTGAGCTGAAAAGGCAGAAGAGAAAACAGTCGAATCGGGAGTCGGCTAGGAGGTCAAGGCTGCGCAAGCAGGCTGAATGTGAAGAGCTACAAAAGAGGGTGGAGGCATTGGGAGGTGAGAATCAAACTCTCAGAGATGAGCTTCAGAAACTTTCTGAAGAATGCGAAAAGCTTACATCTGAAAACAATTCTATCAAGGAAGAGTTGGAACGGTTATGTGGGCCAGAAATAGTTGCTAACCTTGAATGA 1023 0.48 MGTKEDSTTKPSKLSSSTQEVPVPTVPPSYPDWSSSMQAYYNPGAAPPPYYASTVASPTPHPYMWGGQHPLMAPYGTPVPYPAMYPPGSIYAHPSMVVTPGAVHQTTEFEGKGPDGKDKDSSKKSKGNSANACAKAGESGKAGSGSGNDGFSQSGESGSEGSSNGSDENQQESARNKKGGFDLMLVDGANAQNNTAGAISQSPVPGNPVVSMPATNLNMGMDLWNASSASAEAAKMRHNQSGAHGAGGHGEQWMQQDDRELKRQKRKQSNRESARRSRLRKQAECEELQKRVEALGGENQTLRDELQKLSEECEKLTSENNSIKEELERLCGPEIVANLE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02984 340 Coils Coil 271 326 - -
Vivi1g02984 340 SUPERFAMILY Leucine zipper domain 261 317 IPR046347 GO:0003700|GO:0006355
Vivi1g02984 340 MobiDBLite consensus disorder prediction 194 213 - -
Vivi1g02984 340 Pfam Disordered region downstream of MFMR 118 231 - -
Vivi1g02984 340 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 265 280 IPR004827 GO:0003700|GO:0006355
Vivi1g02984 340 SMART brlzneu 258 322 IPR004827 GO:0003700|GO:0006355
Vivi1g02984 340 MobiDBLite consensus disorder prediction 106 186 - -
Vivi1g02984 340 MobiDBLite consensus disorder prediction 1 29 - -
Vivi1g02984 340 Gene3D - 261 315 - -
Vivi1g02984 340 MobiDBLite consensus disorder prediction 253 267 - -
Vivi1g02984 340 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 260 323 IPR004827 GO:0003700|GO:0006355
Vivi1g02984 340 CDD bZIP_plant_GBF1 263 313 IPR045314 GO:0003700|GO:0006355
Vivi1g02984 340 MobiDBLite consensus disorder prediction 229 283 - -
Vivi1g02984 340 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 332 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vivi1g02984 340 Pfam bZIP transcription factor 259 320 IPR004827 GO:0003700|GO:0006355
Vivi1g02984 340 MobiDBLite consensus disorder prediction 1 23 - -
Vivi1g02984 340 MobiDBLite consensus disorder prediction 110 125 - -
Vivi1g02984 340 MobiDBLite consensus disorder prediction 145 170 - -
Vivi1g02984 340 FunFam G-box binding factor 3 261 316 - -
Vivi1g02984 340 Pfam G-box binding protein MFMR 1 96 IPR012900 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02984 1 340 bZIP Transcription Factor Family AT4G36730 53.043 2.79e-104 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1g02984 MFMR_assoc 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02984 K09060 - gmx:778191 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02984 1 65195862 65199647 Vivi1g02984 1 65195862 65199647 ECH