Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02983 ATGAATACTCTGAGCAAGCAAAACAAAAGAACGGAAGACGGAGAGGGTGAAACCAGTGCAGGTGATTCAACAATGTTCGAAAGGGATGTCGTTGATCTGCCTCTGGCCAAAAGTAATGATGATCAACATTTGGTAAAAAATGATATAAGTGAAGATGGCGAGCAAGGCAAGAAGAAAAAGAAGAAGAAACGGAGTAGAGAAAGAAAGCATGAGGACTCGGAGTATAACCAGTTCAAAAGCGATGAATGTGAAGAAGGTGATGATGGGAAGAAAATGAAAAAGAAGAAGAAACTAATTGAAGGAAACACACTTAATGTAGGTAATGAAGATGGAGAGCGGGTCAAGAAGTTAAAGAAAAAGAAGAAGAAACGGAGTGAAGAAAGCGAACATAAGGACTATAAGGAGGACAAAAGCAATGAATGTGAAGATGATGACCAAGGAAAGAAGATGAAAAAGCAGCTGAAACCAATTGAAGAAAACACACTTAATGAGTGTAATGACTTTAGCAGCAATGAAGGTGAAGGTGGAGAGCAGGCCAAGAAGCTGAAGAAAAAGAAGAAGAAACGGAGTGAAGAAAGCGAACATCAGGATCATAACAAGGTCAAAAGCAATGAATGTGAAGAACATGACCATGAAAAGAAAGTGAAGAAGAAGAAGAAGAAACTAATTGAGGGAGGCAGACTTGAGGAGTGTAATGACGTTATAAACAATGGAGATGGTGACCAGGGAAAGACGAAAAAGAAGAATAAACCAAGTCACAAAAGAAAAAGTAAGAAGGACAATGATTTTAATAGCAATCAAGATGAAGTTAATGATCAAGGCAAAAAGATGAAGGAAAAAAAGGAAGCAAAGGCAGTTACAAATGAATCTCCTAATTCTGCATCTAAACCCAAACGGGTAACTTTTTCCGAACAAGTGGAGAAGTTTTGTTGTGATGGCTTATTGCGTGGGGAACGGTTTACACCTGAAGAAGATGAGAAAATCAAAGCATCTGTTTATGACTTTATAAATTCTCATGGTTTGGGAGATGAAGGTGTAGATATGGTTATGCATAGCAGTTGTCACCGTGAAACTAGAGGCTGTTGGAAGGTTATTGCACAAGCCCTACCTTATAGGCCTAAACAGAGTGTGTATACACGCGCTCATGTTTTGTTTGAAAACAATGTGTTCTTTCACTGGACACCTGAGGAGCGTGAATTTGTACGGAAGTCCTTCGAGCAACATGGAGCTGATTGGAGGCCAGTAGCTGATGCTTTGGGTAAAAGTCGAGATCAGGTAAAAGATTTGTGGCGCAGAATAAAGTATGATGGGTTAAAAAGAGGACCTTGGTCCCAAGATGAGTATCAAACTTTATTTAATTTAGTAAACGAAGATCTCCGTATCAGGGCTTCAGAGCCTTATAGAAGATCCCAACATGGTATGTTGCGAGATAATATTTGTTGGGAGGCAATTAGTCACAAGTTGAAAACCCGAGACAGTGCAGTTTGCTGCTTGAAGTGGTATCGAGAGTTAGTATCGTCAAACACTGGTAGTGGTGAATGGTTAGATTCCGATGACTTCCGCATGATAGGTGCTTTATATGATTTGGATGCTTGCTGCATGGAAGAGGTAGACTGGGACTATCTAATTGAGCATAGGTCTGGTGATGCATGCAGACAACGATGGGATCAAATGGTCCAACATATTGGCGATGGTGCAGGGAAGTCATTTATTGAGCAGGTTGAAATTCTTGCCAAGAGATTTTGTCCAGACTTATTGGAAGCAAGAGAGGCTTTTGAGAACAAACCTGTGACTTGTTGA 1800 0.4017 MNTLSKQNKRTEDGEGETSAGDSTMFERDVVDLPLAKSNDDQHLVKNDISEDGEQGKKKKKKKRSRERKHEDSEYNQFKSDECEEGDDGKKMKKKKKLIEGNTLNVGNEDGERVKKLKKKKKKRSEESEHKDYKEDKSNECEDDDQGKKMKKQLKPIEENTLNECNDFSSNEGEGGEQAKKLKKKKKKRSEESEHQDHNKVKSNECEEHDHEKKVKKKKKKLIEGGRLEECNDVINNGDGDQGKTKKKNKPSHKRKSKKDNDFNSNQDEVNDQGKKMKEKKEAKAVTNESPNSASKPKRVTFSEQVEKFCCDGLLRGERFTPEEDEKIKASVYDFINSHGLGDEGVDMVMHSSCHRETRGCWKVIAQALPYRPKQSVYTRAHVLFENNVFFHWTPEEREFVRKSFEQHGADWRPVADALGKSRDQVKDLWRRIKYDGLKRGPWSQDEYQTLFNLVNEDLRIRASEPYRRSQHGMLRDNICWEAISHKLKTRDSAVCCLKWYRELVSSNTGSGEWLDSDDFRMIGALYDLDACCMEEVDWDYLIEHRSGDACRQRWDQMVQHIGDGAGKSFIEQVEILAKRFCPDLLEAREAFENKPVTC 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02983 599 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 393 438 IPR017930 -
Vivi1g02983 599 MobiDBLite consensus disorder prediction 125 158 - -
Vivi1g02983 599 Gene3D - 394 433 - -
Vivi1g02983 599 Pfam Myb-like DNA-binding domain 393 451 - -
Vivi1g02983 599 ProSiteProfiles Myb-like domain profile. 393 434 IPR001005 -
Vivi1g02983 599 MobiDBLite consensus disorder prediction 256 286 - -
Vivi1g02983 599 SUPERFAMILY Homeodomain-like 392 451 IPR009057 -
Vivi1g02983 599 PANTHER GB|AAC33480.1 6 597 - -
Vivi1g02983 599 MobiDBLite consensus disorder prediction 1 300 - -
Vivi1g02983 599 ProSiteProfiles Myb-like domain profile. 435 504 IPR001005 -
Vivi1g02983 599 ProSiteProfiles Myb-like domain profile. 506 559 IPR001005 -
Vivi1g02983 599 MobiDBLite consensus disorder prediction 189 213 - -
Vivi1g02983 599 MobiDBLite consensus disorder prediction 33 58 - -
Vivi1g02983 599 Gene3D - 434 507 - -
Vivi1g02983 599 CDD SANT 393 434 IPR001005 -
Vivi1g02983 599 MobiDBLite consensus disorder prediction 159 173 - -
Vivi1g02983 599 MobiDBLite consensus disorder prediction 67 100 - -
Vivi1g02983 599 SMART sant 389 436 IPR001005 -
Vivi1g02983 599 SMART sant 439 506 IPR001005 -
Vivi1g02983 599 SMART sant 316 387 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02983 392 525 MYB Transcription Factor Family AT4G32730 27.737 7.45e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vivi1g02983 Myb_DNA-bind_6 5.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02983 - - gsj:114382741 533.102