Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02967 ATGTTGAATCTAATTAATACAGATTTCCTTTTCTCTTCCTTGGTGCCTTTCATTTGTTCACCAAATCTGAAAACAATGGTTTCTTCCTGCATTCGATCTTACTCTCTATTTCTTGCACTTTTGTTCTTTTCTGCCAATGGAACAAACTTCACATACCCTGCGAATTCCCGCCTTTCCTGTGACACATATGTTGCATACTTTGCTCACTTTCCAAATTTTTTAACCCTCACAACCATATCTGATATGTTTGACACCACTCCTCAATCCATTGCAAGAGCAAGCAACATAAAAGACGAAAATATGGACCTTGTTCCAGGCCAACTTTTGCTAATACCTATAACTTGTGGCTGCAGTGGAAATGGAAACTACTCTTTTGCTAATATCTCACACTTGATCAAACAAGGTGAAAGTTACTACTATCTTTCAACCATTTCATTTCAGAATCTCACCAATTGGATGACAGTGGAAGATTCAAATCCTAACCTGAATCCATATTTGTTGACAGTGGGCACCAAAATAGTCATTCCTTTGTTCTGTAGGTGCCCTTCAAAAGGGATAGAGTCTTTGATTACTTATGTGTGGCAGCCTAATGACAATCTTACCCTTGTAGCTTCCAAGTTTGGTGCATCACAGCATGACATAATCACTGCAAATGCAAACAATTTTGGCCAGAATTTTACTGCTGCAACCAACCTTCCAGTTTTTATCCCAGTGAAAAGCTTACCAGCTATTTCACAATTATTACATTATTCTTCAAGTGGAAGAAAGAAAAACAATCATTTTCATATTATCATTTCCATTGGTATATGTCTAGGATGCACTATTCTGATTTCACTGTCATTACTAGTTTATGTGTATTGTTTGAGGAAGAGAAAAGCTTGTGAGAATAAGTGTGCGCCTTCTGTGGAGATAACAGATAAGTTAATTTCAGAAGTTTCAAACTATGTAAGTAAGCCAAAAGTGTATCAAGCTTGTATGATTATGGAAGCTACAATGAACTTCAACGAACAATGCAGGATAGGAAAATCTGTGTACAAAGCTAAAATAGACGGTCATGTTTTAGCTGTGAAAAATGTTAAGGAAGACATCCCAGTCACAGAAGAGTTGATGATTCTTCAAAAGGTAAATCATGCAAATCTTGTAAAACTAATCGGCGTCTCTTCCGGATATGTTGGAAATCACTTTCTTGTATATGAATATGCTGAAAATGGATCACTTTATAACCGGCTGTTCTCTGAATTTTCCACTGCTTCAAGCACAGTGGGTTCCCTCACATGGAATCAGAGGCTAAACATAGCAATTGATGTTGCAATTGGTCTGCAATACATGCATGAACACATAGAACCAAGTATAGTCCATAGAGACATCACATCAAGTAACATCCTTCTTGACTCAAACTTTAAGGCCAAGATATCAAATTTTTCTGTTGCAAGAACCACAAAGAATCCTATGATAACAAAAGTCGATGTTTTTGCTTATGGTGTTGTTCTGTTAGAGTTATTAACAGGAAAGAAGTTTTTATGGTATAGCGAAAGTAGCGAAGCGAATATGTTATGGAAAGATATTAAGGGTTTGTTTGATATAGAAGAGAAGAGAGAGGAAAGGATTAGAAGATGGATGGATCCTAAGTTGGGAAGGTCTTTTAATGTTGTTGAAGCTCTTAGTTTGTTCTCTTTGGCAATGAATTGCATAAAAGAACAATCTTTGTTAAGACCAACAATGGGAGAAGTTGTTCTTAGCCTTTCCCTTCTCACTCAACATTCTCCTACTTTGTTGGAGAGGTCTTGTACTTACGGATCAGATGTTGAGGTTATAACTGGTATGGTTAGTCCCATCTTAGCTCGTTGA 1848 0.369 MLNLINTDFLFSSLVPFICSPNLKTMVSSCIRSYSLFLALLFFSANGTNFTYPANSRLSCDTYVAYFAHFPNFLTLTTISDMFDTTPQSIARASNIKDENMDLVPGQLLLIPITCGCSGNGNYSFANISHLIKQGESYYYLSTISFQNLTNWMTVEDSNPNLNPYLLTVGTKIVIPLFCRCPSKGIESLITYVWQPNDNLTLVASKFGASQHDIITANANNFGQNFTAATNLPVFIPVKSLPAISQLLHYSSSGRKKNNHFHIIISIGICLGCTILISLSLLVYVYCLRKRKACENKCAPSVEITDKLISEVSNYVSKPKVYQACMIMEATMNFNEQCRIGKSVYKAKIDGHVLAVKNVKEDIPVTEELMILQKVNHANLVKLIGVSSGYVGNHFLVYEYAENGSLYNRLFSEFSTASSTVGSLTWNQRLNIAIDVAIGLQYMHEHIEPSIVHRDITSSNILLDSNFKAKISNFSVARTTKNPMITKVDVFAYGVVLLELLTGKKFLWYSESSEANMLWKDIKGLFDIEEKREERIRRWMDPKLGRSFNVVEALSLFSLAMNCIKEQSLLRPTMGEVVLSLSLLTQHSPTLLERSCTYGSDVEVITGMVSPILAR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02967 615 ProSitePatterns Tyrosine protein kinases specific active-site signature. 451 463 IPR008266 GO:0004672|GO:0006468
Vivi1g02967 615 ProSiteProfiles Protein kinase domain profile. 302 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02967 615 SUPERFAMILY Protein kinase-like (PK-like) 316 582 IPR011009 -
Vivi1g02967 615 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 51 588 - -
Vivi1g02967 615 Gene3D Phosphorylase Kinase; domain 1 306 400 - -
Vivi1g02967 615 Pfam Protein tyrosine and serine/threonine kinase 356 481 IPR001245 GO:0004672|GO:0006468
Vivi1g02967 615 Gene3D LysM domain 75 120 IPR036779 -
Vivi1g02967 615 Gene3D Transferase(Phosphotransferase) domain 1 484 596 - -
Vivi1g02967 615 Gene3D Transferase(Phosphotransferase) domain 1 401 483 - -
Vivi1g02967 615 ProSiteProfiles LysM domain profile. 190 234 IPR018392 -
Vivi1g02967 615 Pfam LysM domain 75 112 IPR018392 -
Vivi1g02967 615 Pfam LysM domain 132 176 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02967 Vivi-Chr1 64794908 64797317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02967 94 584 Receptor kinase-like Gene Family AT3G21630 29.872 7.54e-58 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi1g02967 PK_Tyr_Ser-Thr 3.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02967 - - vra:106777834 634.024