Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02954 ATGTTCCTTCATCATCATCATCATCATCATCACAATTCAAAGCTTTCTACTCTCATCATCATCATCATCATCATCATCACAATCTTCGTAACAGTAATAACTGCCGATCAAAACAACAATCACTGCAAGCGAAGATGCGGAAAACAAACCGTGAACTACCCATTCGGATTCTCAGAAGGATGCAAAATCGAATTAACCTGCAGCAACAACGACAATCAAATCAAAATTGGAAACTTAACTGTTCAAAAACTGAACTCTGATAGCATATTCATATCTCTACCAGCGAAATGCAATCGTAGCACCAGTTTCATATATCCGCTTTTCGGCAAAAACTATGCTCCAACCTGGAACAACACCTTCCTCGTCCAGAGATGTAACCCAAGTCTTAATGGTTGTGTTATTCCAACTTCGATTTTTGCTGGAACACATAGAGATGTTGAAGGTTGTGATTCGAGAAAAAGTGAAAATATCAATTGCTTCACGCGATCGCAGCGTAAGAGAACGGGCGAGGATGTTCTTACTCTTGGTGATTGGAATGGAACTCGATGTGAATTGTTGTTCTCTGCTATTGCTGTTGATGACAGCACAGTCGATGATGTTCCGCTTCAGTTTCAGGTGGTTGAGTTAGGGTGGTGGCTTGAAGGTCCTTGTTTATGTACTGATGATGCTAATTGTACGGAGGTTCGTCTTGCCGGAGGAAAACAAGGTTTCCGGTGTCGTTGCCGTGAAGGTTTAGTCGGAGATGGATTTGTAAACGGTACCGGTTGCCAGAGAGCTTCACATTGCAGTCTTTCAACACTTGGGTCTAGCAAATGTGCAAAAGCACTCAGAATTGGTTTACTTCTTGGAGTGATCATAGTTGGAGCCTCAGTGACGGCTGCACTGTCTCTAGTATGCTACTTCACGAATCGCCGATCAAAATGGCTAACAAAACAATTGACAGTAAGGCGCCTACTAAGAGAAGCTGCAGGAAACTACATTGTTCCTCTCTACCCTTACAAAGAAGTAGAAAGGGCCACAAATTTTTTCTCTGAGAAACACAGGCTAGGAACTGGTGCTTACGGCACCGTTTACGCTGGAAACCTTCACAACAACGAATTGGTTGCTATAAAAAAGATCAGGTATAGAGACACCAACAGTGTTGACCAAGTCATGAATGAAATCAAACTCCTATCTTCGGTAAGTCACCCGAATTTAGTTCGACTTTTAGGTTGCTGCATAGAGAAAGGTGAACACATACTTGTTTATGAGTATATGCCAAATGGAACATTGTCTCAACATTTACAAAGGGAAAGAGGTGGAACACTTCCTTGGACAATAAGACTCACCATTGCCTCTGAAACCGCTAATGCTGTAGCGTTTCTTCATTCTTCAAATCCTCCGATTTATCACAGAGACATAAAATCTAGTAACATACTATTGGACTTTAGTTTTCAATCAAAAGTAGCAGATTTCGGACTTTCTAGGCTAGGCATGACAGAAATATCACATATCTCAACCGCGCCACAAGGGACTCCAGGTTATGTCGATCCACAATACCATCAAAACTTTCATCTTTCAGATAAAAGTGATGTCTATAGTTTCGGAGTTGTTTTGGTAGAGATAATAACAGCGATGAAAGTGGTTGATTTTGGTAGACCTCAAAGTGAGATAAATTTGGCAGCACTTGCTATTGAAAAGATTAGGAAAGGTTGTGTCGACGACATTATAGATCCTTTCCTTGATCTTAATAGGGATGCATGGACACTCTATTCTGTTAACAAGGTAGCTGAGCTTGCATTTAGATGCCTCGCTTTTCATAGCGAATCGAGGCCTAGTATGATTGAAGTTGCTGAGGAGTTAGATCATATCAGACGTAGCGGATGGGCGACAATGGAGGAAACTATATGCTTAGGCTCATCGGTTGGATCCGGGTGTTCATCACCTCGTTATAATGGAAAGGAGAATTTAGTCTCAAAGAATGAAATCCTGGTTGTTCCACAAAAGACTAATAGTTTTTTGCATACAATAGAGGAAGTGAAGGATGGTTCTCCTGAATCTGTTCATGATACTTGGTCAAGTAGACCTAGCTCACCTTCAACAAACAGCTTGTTAGGAAATGTTGTTCAGTGA 2112 0.4119 MFLHHHHHHHHNSKLSTLIIIIIIIITIFVTVITADQNNNHCKRRCGKQTVNYPFGFSEGCKIELTCSNNDNQIKIGNLTVQKLNSDSIFISLPAKCNRSTSFIYPLFGKNYAPTWNNTFLVQRCNPSLNGCVIPTSIFAGTHRDVEGCDSRKSENINCFTRSQRKRTGEDVLTLGDWNGTRCELLFSAIAVDDSTVDDVPLQFQVVELGWWLEGPCLCTDDANCTEVRLAGGKQGFRCRCREGLVGDGFVNGTGCQRASHCSLSTLGSSKCAKALRIGLLLGVIIVGASVTAALSLVCYFTNRRSKWLTKQLTVRRLLREAAGNYIVPLYPYKEVERATNFFSEKHRLGTGAYGTVYAGNLHNNELVAIKKIRYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEKGEHILVYEYMPNGTLSQHLQRERGGTLPWTIRLTIASETANAVAFLHSSNPPIYHRDIKSSNILLDFSFQSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFGRPQSEINLAALAIEKIRKGCVDDIIDPFLDLNRDAWTLYSVNKVAELAFRCLAFHSESRPSMIEVAEELDHIRRSGWATMEETICLGSSVGSGCSSPRYNGKENLVSKNEILVVPQKTNSFLHTIEEVKDGSPESVHDTWSSRPSSPSTNSLLGNVVQ 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02954 703 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 20 687 IPR044652 GO:0004672
Vivi1g02954 703 SMART serkin_6 343 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02954 703 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Vivi1g02954 703 SUPERFAMILY Protein kinase-like (PK-like) 325 614 IPR011009 -
Vivi1g02954 703 Pfam Protein kinase domain 344 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02954 703 MobiDBLite consensus disorder prediction 675 703 - -
Vivi1g02954 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Vivi1g02954 703 FunFam Wall-associated receptor kinase-like 14 310 418 - -
Vivi1g02954 703 Gene3D Transferase(Phosphotransferase) domain 1 419 629 - -
Vivi1g02954 703 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g02954 703 MobiDBLite consensus disorder prediction 682 703 - -
Vivi1g02954 703 FunFam Wall-associated receptor kinase-like 20 419 627 - -
Vivi1g02954 703 Gene3D Phosphorylase Kinase; domain 1 322 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02954 Vivi-Chr1 64436399 64440893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02954 18 701 Receptor kinase-like Gene Family AT2G23450 53.736 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vivi1g02954 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02954 - - gmx:100810861 973.77