Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02928 ATGGGAGGAACCACAGAACTGGATGTTCTTACATCACAGCTTCAACAAACATTCAAACAAGTTCAACATGACAAAACATCCATGAGATGCTTTAGGTCAACCTTAAAAGAATTGTCTCCACTGGTTCACGAGATCGACCAATATAACGATCAATTGAATCCTCCTAGAGAGGAAATCAAGCTTCTCACCAAAGAAAATCCCGCAGAACAAAGGAATCTTTGCTGGAAGAGGTTTAGTTCTTGGTTTCATCACTGTTTAGATGGAGTTTGTCACAAGAAGAAAGATGATTTTGGTTCATGTGTTGCTGGTAACAACAAACAAGCTGTTATGGCGAAAGATGTTAAGGATACACTTTATAAGCTGAAGGAAATTCTTGAAATTGTTAATAAGGAGAATTTTGAGAAGAAAATAAGTGGATCTGGAGGGCTAGTTTTTAGGGGTCCTTTTGGTGTTCCTCACAATCCTGAATTTACTGTTGGTTTGGATTTGTCAATGATTAAGTTGAAGATGGAAGTTCTTAGGGATGGTGGATCTACTATTTTGGTGACTGGTTTAGGAGGAATGGGTAAAACTACTTTGGCTGCAAAGCTTTGTTGGGATTTACAAGTCAAGGGTAAATTCAAGGGAAATATTTTATTTGTTGTCTTTTCGAAAACGCCTCAGTTGAAGATTATTGTAGAGAGAATATTTGAACATTGTGGAAATCTAGTGCCTGAGTTTCAAAGCGACGAAGATGCTGTTAATGAATTGGGGCTTTTGCTGAAGAAAATTGAGGGTCCAATATTGTTGGTCTTAGATGATGTTTGGCCTGGCTCAGAAGATCTTGTTGAGAAATTTCAATTCCAGATATCAGATTATAAAATTTTGGTAACATCAAGGGTTGCACTTTCAAGATTTGACAAAACCTTTATCCTAAAGCCTCTTGTACATGAAGATGCAGTAACCCTTTTCCGCCACTATACACAATTGGAGAAAAAGAATTCGAACATTCCGGACAAAGATCTTATCCAAAAGGTTGTGAAACATTGCAAGGGTTTACCTCTTGCTGTTAAAGTGCTTGCAAAGTCACTCAGTAATCGGCCATATGAGTTGTGGGAAAAGATTGTGAAGCAACTTTCACTAGGCCGTTCTATACTTGATTCTAATACTGAATTACTTACTCGCCTCCGAAAGATTTTGGACGTTTTGGAAGATAACCCCATCAATAAAGAATGCTTCATGGATCTAGCATTATTCCCTGAAGACCAAAGGATTCCTGTTGCTGCTCTCATTGATATATGGGCAGAGTTGTATGGACTAGATGATGCCGGCAAAGAAGCAATGAATATCATCAACAAATTAGACTCCATGAATCTGGCTAATCTCTTAATAGCAAGGAAAAATGCAAGTGACACAGAAAATTACTACTACAATAACCACTTCATAGTCCTTCACGATCTTCTAAGAGAGCTTGGAATTTATCAAAGCACCCAGGAACCAATAGAACAAAGAAAAAGACTTCTTATTGACGTAAATGAAAACAAACGTAATCGCTGGCTTGAGGAGAAGAAGAAAGGCACAGTGACTCGCATATTGTCCAAATTAGTTAAATGGTGTGTTAAACCGAAGCCTCAACAGATCCCTGCCCGCACATTATCTATATCAACTGATGAAACTTGTGCTTCAGATTGGTCCCAAGTGCAGGCAGCTCTAGTTGAGGTTCTGATTTTAAATCTTCAAACCAAGCAGTACACATTTCCAGAGTTGATGGAGAAGATGAGCAAACTGAAAGCTCTTATAGTCATAAATCACGGTTTCCGTCTTTCTGAACTGAACAATTCTGAGCTACTTAGCTCTTTATCCAATCTTAACAGAATCAGGCTAGAGCGGATTTCCGTTCCTTCCTTTGGCACATTGAAGAATCTGAAAAAATTATCCCTCTACATGTGTAATACGAGACTAGCTTTTGAAAAGGGTAGCATTCTAATTTCAGATGCATTTCCAAATTTAGAAGATTTGAGCTTTGACTATTGCAAGGATTTGATGGCATTGCCTAATGGAGTGTGTGATATCACCTCATTAAAAAAGCTCAGTATTACTAATTGCCATAAGCTTTCGTCGCTGCCCCGAGATATTGGAAAGTTGGAGAATTTGGAACTCTTGAGCCTGATTTCGTGTACTGATTTGGTAGAGCTACCAGATTCTATTGGAAGCCTTTCGAATCTAAGTCTACTTGACATCTCCAACTGCATAAGCCTTTCAAGTTTACCCGAGGACATTGGCAATCTGTCTAATCTAAGAAATCTCTACATGACTAGTTGTGCAAGTTGTGAGTTGCCATTCTCGGTTGTCAATCTTGAGAATTTAAAAGTGATATGTGACGAAGAGACGGCCGTTTCATGGGAATCTTTCCAATCTATGATATCCAATTTAACTATAGAGATTCCTCAAGTTGAAGTCAATTTAAATTGGCTTCACGCAATTCGCTCCTAA 2472 0.3839 MGGTTELDVLTSQLQQTFKQVQHDKTSMRCFRSTLKELSPLVHEIDQYNDQLNPPREEIKLLTKENPAEQRNLCWKRFSSWFHHCLDGVCHKKKDDFGSCVAGNNKQAVMAKDVKDTLYKLKEILEIVNKENFEKKISGSGGLVFRGPFGVPHNPEFTVGLDLSMIKLKMEVLRDGGSTILVTGLGGMGKTTLAAKLCWDLQVKGKFKGNILFVVFSKTPQLKIIVERIFEHCGNLVPEFQSDEDAVNELGLLLKKIEGPILLVLDDVWPGSEDLVEKFQFQISDYKILVTSRVALSRFDKTFILKPLVHEDAVTLFRHYTQLEKKNSNIPDKDLIQKVVKHCKGLPLAVKVLAKSLSNRPYELWEKIVKQLSLGRSILDSNTELLTRLRKILDVLEDNPINKECFMDLALFPEDQRIPVAALIDIWAELYGLDDAGKEAMNIINKLDSMNLANLLIARKNASDTENYYYNNHFIVLHDLLRELGIYQSTQEPIEQRKRLLIDVNENKRNRWLEEKKKGTVTRILSKLVKWCVKPKPQQIPARTLSISTDETCASDWSQVQAALVEVLILNLQTKQYTFPELMEKMSKLKALIVINHGFRLSELNNSELLSSLSNLNRIRLERISVPSFGTLKNLKKLSLYMCNTRLAFEKGSILISDAFPNLEDLSFDYCKDLMALPNGVCDITSLKKLSITNCHKLSSLPRDIGKLENLELLSLISCTDLVELPDSIGSLSNLSLLDISNCISLSSLPEDIGNLSNLRNLYMTSCASCELPFSVVNLENLKVICDEETAVSWESFQSMISNLTIEIPQVEVNLNWLHAIRS 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02928 823 Gene3D - 390 485 IPR036388 -
Vivi1g02928 823 Gene3D Ribonuclease Inhibitor 530 801 IPR032675 -
Vivi1g02928 823 PRINTS Disease resistance protein signature 730 746 - -
Vivi1g02928 823 PRINTS Disease resistance protein signature 179 194 - -
Vivi1g02928 823 PRINTS Disease resistance protein signature 255 269 - -
Vivi1g02928 823 PRINTS Disease resistance protein signature 343 357 - -
Vivi1g02928 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 409 IPR027417 -
Vivi1g02928 823 Gene3D - 148 301 IPR027417 -
Vivi1g02928 823 Pfam NB-ARC domain 179 384 IPR002182 GO:0043531
Vivi1g02928 823 SUPERFAMILY RNI-like 576 785 - -
Vivi1g02928 823 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 10 818 IPR039203 GO:0050832
Vivi1g02928 823 Gene3D - 308 389 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02928 Vivi-Chr1 63847383 63851847 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02928 182 820 WRKY Transcription Factor Family AT5G45050 22.270 1.22e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02928 - - gmx:100800632 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02928 1 63847383 63851847 Vivi1g02928 1 63847383 63851847 ECH