Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02926 ATGAGTAGCGCCACACAGATTCTTTCCCTTACTACAAGATTTCATGATATCCTCAATAAGATATCACAAATTGTTGAAAAAGCTAGAAACAACAAACGTACAAGGAGATTATTGAGATCCACTTTAAGGGATTTAACTCCTCTTGTTAAAGACATTAACCAATACAATCAACACTTGAATCAACCTCGACTAGAAATTAACTCTCTTATACAAGAAAATGTTGCATGCAAATGCTCTTCTAACAATACCTTGTGGAACAAGTGTCTCTCGTGGCTTCGGAATGGTTCTTATGTTGTTGATGATTCGGAATCTCTTACTGTAGAGGATGTTAGAGAGACACTTTACAAGGTCAGAGAAATTCTTGAGCTTATCAACAACGAAAGTTTTGAACAGAAACTTAATGAAAATGGAGGAGCACCATTTAAGAGTCCTTTCGGTGTTCCTGAAAATCCAGAATTCACTGTTGGGTTGGATATACCGTTTACAAAGCTGAAAATGGAGCTTCTCAAGGAAGGTAGTTCCACCCTTGTGTTGACTGGTTTGGGAGGATTGGGAAAAACCACTTTGGCTACAAAGCTTTGTTGGGATGAACATGTTAAGGCTAAATTCAAGGAGAATATAATATTTGTAACATTCTCAAAGACTCCGATGTTGAAGATTATAATAGAGAGACTATTTGAACATTGTGGATACTATCCGGTGCCTGAGTTTCAGAGTGATGAAGATGCTGTCAATAGATTGGGACTTTTGCTGAAGAAAGTTGAGGGAAGTCCACTTTTGTTGGTTCTGGATGATGCTTGGCCAAACTCAGAAACCATTGTTGAGAAATTTCAGTTCCAGATATCAGATTTCAAAATTCTGGTCACTTCAAGGGTTGCATTTCAAAGATTTAGCACAACGTGTGTCTTAAAACCTCTCGTCCATGAAGATGCAGTAATATTTTTCAATCACTATGCTCAGATGGAAAAAGATAATTCAAATATTCTCTACAAAGATCTCATGGAAAAGGTTGTGAAAAATTGCAAGGGTTTACCGCTTGCCCTCAAAGTGACTGCAACATCACTCAGAAATCGGCCTTATGACTTTTGGCGAAAGATAGGAAAGGAACTATCACAAGGTCATTCTATACTTGATTCTAACACTGAATTACTTTCTCTCCTTCAAAAGATACTAGATGTTTTGGAAGATAATCCCATACTCAAAGAGTGTTTCAAGGACCTAGCCTTATTTCCCGAAGACCATAGAATTCCTGTTGTTGCTCTCATTTATATGTGGACAGAGTTGTATGAACTCGATGACAACGGAATCGAAGCAATGGAAATCATCAACAAATTAAGCTCCATGAATCTGGCTCATGTCTCAATAACAAGGAAAAATGCAAGTGACGCAGACGATTACAACTACAATAACCACTTCATAACCCTTCATGATCTTGTAAGAGATCTTGGAATTTACCAAAGCACCAAAGAACCAATTGAGCAGAGAAAAAGAATGATCATTGATATGAATGAAAATAAACATGAATGGTGTATCGGGGAGAAGCAGCAAGGCCTGATGATCCGTATATTGTCAAAATTTCTTAGTTTATGCGTGAAACAAAATCCTCAACAGCTCGATGCCCGAATATTGTCTGTATCAACTGGTGACACTTGTGCGTCAGATTGGTCCCAAGTTCAAACAACTCAAGCTGAGGTTCTTATTTTAAATCTCCATACCAAGCAGTACTTATTTCCGTCAATGGAGAAAATGAGTAAACTGAAAGTTCTGATAATCACAAACTACGGTTTCCATCCTTCTGAACTGAACAACTTTGAGCTACTCGACTCTTTACACAACCTGACAAGAATAAGACTAGAGCGGATTTCCATTCCTTCCTTCGGAATATTGAAGAATCTGAAAAAACTATCGCTCTACATGTGTAATACGAATCTCGCTTTTGAAAAGGGTAACATCCTGATTTCAGATGCATTTCCTAATCTAGAAGAGTTGAATATTGATTACTGCAAAGATTTAGTGGTATTGCCTAATGCAGTCTGTGAAATCACCCCATTAAAGAAACTCAGTGTTACTAATTGCCACAAACTTTCTGCACTTCCACAAGATATTGGAAAATTGGAGAATTTAGAACTTCTAAGACTGAGTTCCTGCACTGATTTGGAAGTGATGCCGAATTCCATTGGAAACCTTTCAAATCTAAGACATCTTGACATATCAAACTGCATAAGCCTTTCAAGTTTACCTGAGGAATTCGGTAATCTTTGCAATCTAAGGAATCTGTACATGTCAAGTTGTGCAAGCTGTGAGTTGCCATTCTCAGTCGTCAATCTTTTGAATTTGAAGGTGATAACGTGCGATGAAGAGACGGCTGCTTCATGGGAAGCTTTCCAACCTATGCTTCCCAATATGAAGATAGAGGTTCCTCATGTTGATGTTAACTTAAACTGGCTTCGATAA 2454 0.3786 MSSATQILSLTTRFHDILNKISQIVEKARNNKRTRRLLRSTLRDLTPLVKDINQYNQHLNQPRLEINSLIQENVACKCSSNNTLWNKCLSWLRNGSYVVDDSESLTVEDVRETLYKVREILELINNESFEQKLNENGGAPFKSPFGVPENPEFTVGLDIPFTKLKMELLKEGSSTLVLTGLGGLGKTTLATKLCWDEHVKAKFKENIIFVTFSKTPMLKIIIERLFEHCGYYPVPEFQSDEDAVNRLGLLLKKVEGSPLLLVLDDAWPNSETIVEKFQFQISDFKILVTSRVAFQRFSTTCVLKPLVHEDAVIFFNHYAQMEKDNSNILYKDLMEKVVKNCKGLPLALKVTATSLRNRPYDFWRKIGKELSQGHSILDSNTELLSLLQKILDVLEDNPILKECFKDLALFPEDHRIPVVALIYMWTELYELDDNGIEAMEIINKLSSMNLAHVSITRKNASDADDYNYNNHFITLHDLVRDLGIYQSTKEPIEQRKRMIIDMNENKHEWCIGEKQQGLMIRILSKFLSLCVKQNPQQLDARILSVSTGDTCASDWSQVQTTQAEVLILNLHTKQYLFPSMEKMSKLKVLIITNYGFHPSELNNFELLDSLHNLTRIRLERISIPSFGILKNLKKLSLYMCNTNLAFEKGNILISDAFPNLEELNIDYCKDLVVLPNAVCEITPLKKLSVTNCHKLSALPQDIGKLENLELLRLSSCTDLEVMPNSIGNLSNLRHLDISNCISLSSLPEEFGNLCNLRNLYMSSCASCELPFSVVNLLNLKVITCDEETAASWEAFQPMLPNMKIEVPHVDVNLNWLR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02926 817 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 14 816 IPR039203 GO:0050832
Vivi1g02926 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 407 IPR027417 -
Vivi1g02926 817 Pfam NB-ARC domain 163 375 IPR002182 GO:0043531
Vivi1g02926 817 PRINTS Disease resistance protein signature 727 743 - -
Vivi1g02926 817 PRINTS Disease resistance protein signature 175 190 - -
Vivi1g02926 817 PRINTS Disease resistance protein signature 253 267 - -
Vivi1g02926 817 PRINTS Disease resistance protein signature 341 355 - -
Vivi1g02926 817 Gene3D Ribonuclease Inhibitor 532 801 IPR032675 -
Vivi1g02926 817 Gene3D - 390 484 IPR036388 -
Vivi1g02926 817 SUPERFAMILY L domain-like 476 783 - -
Vivi1g02926 817 Gene3D - 306 389 IPR042197 -
Vivi1g02926 817 Gene3D - 141 298 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02926 Vivi-Chr1 63817630 63821193 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02926 629 764 Receptor kinase-like Gene Family AT1G28440 33.784 3.48e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02926 - - gmx:112997603 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02926 1 63817630 63821193 Vivi1g02926 1 63817630 63821193 ECH
Vivi2g03219 2 133826940 133830630 Vivi1g02926 1 63817630 63821193 PCT