Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02864 ATGGCAGTGCCTGCTGATGAAGGACAGCTTATAAGCATGCTGATTAAACTCATGAATGCAAAGAAGACAATGGAGATTGGTGTATATACTGGATACTCTCTCCTATCTACTGCTCTTGCTCTTCCCTCTGATGGAAAGGTATTGGCTTTCGACATCAGTCGTGAATACTATGAGTTAGGATTGCCGATGATTGAAAAAGCTGGAGTGCTTCACAAGATTGATTTTAGAGAAGGATATGCTCTCCATTTTCTTGATGAACTTCTTGAAGATGAAAATAACAAAGGAACATTTGATTTTGTTTTTGTGGATGCTGATAAGAATAACTACATAAACTATCACAAGAATGTAATTGATCTTGTTAAAGTTGGGGGATTGATTGGATATGATAACACCTTATGGAGTGGGTCAGTGGCGGTTCCGCCTGATGCACCTATGATAGATATCATTAGGAATTTACGTGATTATGTGATTGAACTCAACAAGTATCTAGCTCAAGATTCAAGGATTGAGATTTGTCAACTCTCTGTAGGAGATGGAATCACGCTTTGTCGTCGTATCAACTGA 564 0.3848 MAVPADEGQLISMLIKLMNAKKTMEIGVYTGYSLLSTALALPSDGKVLAFDISREYYELGLPMIEKAGVLHKIDFREGYALHFLDELLEDENNKGTFDFVFVDADKNNYINYHKNVIDLVKVGGLIGYDNTLWSGSVAVPPDAPMIDIIRNLRDYVIELNKYLAQDSRIEICQLSVGDGITLCRRIN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02864 187 Gene3D Vaccinia Virus protein VP39 1 187 IPR029063 -
Vivi1g02864 187 PANTHER O-METHYLTRANSFERASE-RELATED 1 186 - -
Vivi1g02864 187 CDD AdoMet_MTases 25 126 - -
Vivi1g02864 187 Pfam O-methyltransferase 1 186 IPR002935 GO:0008171
Vivi1g02864 187 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 185 IPR029063 -
Vivi1g02864 187 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 186 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02864 Vivi-Chr1 62279303 62281266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g02864 1 187 Monolignol Biosynthesis Gene Families AT4G34050 73.262 3.76e-101 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02864 K00588 - gmx:100305498 306.99